Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH7O60245 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH7O60245 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH7O60245 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PCDH7O60245 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH7O60245 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDH7O60245 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDH7O60245 AC092368.3-202ENST00000574180 1591 ntBASIC18.74■□□□□ 0.59
PCDH7O60245 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH7O60245 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH7O60245 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDH7O60245 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDH7O60245 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH7O60245 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PCDH7O60245 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH7O60245 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDH7O60245 AC005332.7-201ENST00000614046 2005 ntBASIC18.73■□□□□ 0.59
PCDH7O60245 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDH7O60245 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH7O60245 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH7O60245 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH7O60245 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH7O60245 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PCDH7O60245 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCDH7O60245 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDH7O60245 HLA-B-256ENST00000639848 1089 ntBASIC18.73■□□□□ 0.59
PCDH7O60245 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH7O60245 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDH7O60245 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDH7O60245 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH7O60245 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH7O60245 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDH7O60245 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH7O60245 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH7O60245 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDH7O60245 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PCDH7O60245 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH7O60245 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDH7O60245 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH7O60245 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDH7O60245 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDH7O60245 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH7O60245 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDH7O60245 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDH7O60245 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDH7O60245 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDH7O60245 AC090192.1-201ENST00000517740 490 ntBASIC18.72■□□□□ 0.59
PCDH7O60245 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.72■□□□□ 0.59
PCDH7O60245 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDH7O60245 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PCDH7O60245 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH7O60245 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH7O60245 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCDH7O60245 AC124283.5-201ENST00000624661 1809 ntBASIC18.72■□□□□ 0.59
PCDH7O60245 TFP1-202ENST00000475455 1573 ntBASIC18.72■□□□□ 0.59
PCDH7O60245 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDH7O60245 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH7O60245 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH7O60245 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDH7O60245 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDH7O60245 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH7O60245 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH7O60245 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH7O60245 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH7O60245 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH7O60245 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH7O60245 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH7O60245 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH7O60245 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH7O60245 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDH7O60245 AC060766.5-201ENST00000590539 871 ntBASIC18.71■□□□□ 0.59
PCDH7O60245 AC083880.1-201ENST00000608266 535 ntBASIC18.71■□□□□ 0.59
PCDH7O60245 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH7O60245 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH7O60245 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH7O60245 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDH7O60245 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH7O60245 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH7O60245 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDH7O60245 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.71■□□□□ 0.58
PCDH7O60245 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDH7O60245 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH7O60245 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH7O60245 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PCDH7O60245 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms