Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CDX4O14627 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CDX4O14627 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDX4O14627 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDX4O14627 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.01■□□□□ 0.63
CDX4O14627 AC112907.2-201ENST00000448639 330 ntBASIC19.01■□□□□ 0.63
CDX4O14627 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.01■□□□□ 0.63
CDX4O14627 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.01■□□□□ 0.63
CDX4O14627 ZNF444P1-201ENST00000559497 298 ntBASIC19.01■□□□□ 0.63
CDX4O14627 AC083849.1-201ENST00000615227 514 ntBASIC19.01■□□□□ 0.63
CDX4O14627 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.01■□□□□ 0.63
CDX4O14627 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
CDX4O14627 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDX4O14627 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CDX4O14627 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDX4O14627 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.01■□□□□ 0.63
CDX4O14627 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDX4O14627 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDX4O14627 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDX4O14627 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CDX4O14627 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDX4O14627 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CDX4O14627 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDX4O14627 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDX4O14627 TSPY21P-201ENST00000433481 731 ntBASIC19■□□□□ 0.63
CDX4O14627 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CDX4O14627 TSPY23P-201ENST00000440136 739 ntBASIC19■□□□□ 0.63
CDX4O14627 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDX4O14627 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19■□□□□ 0.63
CDX4O14627 AP003041.3-201ENST00000527151 707 ntBASIC19■□□□□ 0.63
CDX4O14627 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19■□□□□ 0.63
CDX4O14627 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19■□□□□ 0.63
CDX4O14627 HYMAI.1-201ENST00000620949 238 ntBASIC19■□□□□ 0.63
CDX4O14627 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDX4O14627 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDX4O14627 ECEL1P1-201ENST00000373592 1742 ntBASIC19■□□□□ 0.63
CDX4O14627 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.99■□□□□ 0.63
CDX4O14627 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDX4O14627 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDX4O14627 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDX4O14627 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.99■□□□□ 0.63
CDX4O14627 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.99■□□□□ 0.63
CDX4O14627 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDX4O14627 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDX4O14627 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDX4O14627 PHGDH-210ENST00000641115 1638 ntBASIC18.99■□□□□ 0.63
CDX4O14627 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.99■□□□□ 0.63
CDX4O14627 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.99■□□□□ 0.63
CDX4O14627 KRT8P45-201ENST00000414328 1447 ntBASIC18.99■□□□□ 0.63
CDX4O14627 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDX4O14627 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDX4O14627 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDX4O14627 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDX4O14627 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.98■□□□□ 0.63
CDX4O14627 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDX4O14627 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.98■□□□□ 0.63
CDX4O14627 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDX4O14627 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDX4O14627 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.98■□□□□ 0.63
CDX4O14627 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.98■□□□□ 0.63
CDX4O14627 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.98■□□□□ 0.63
CDX4O14627 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.98■□□□□ 0.63
CDX4O14627 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.98■□□□□ 0.63
CDX4O14627 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
CDX4O14627 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDX4O14627 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDX4O14627 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDX4O14627 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.97■□□□□ 0.63
CDX4O14627 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDX4O14627 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDX4O14627 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDX4O14627 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDX4O14627 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDX4O14627 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.97■□□□□ 0.63
CDX4O14627 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.97■□□□□ 0.63
CDX4O14627 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDX4O14627 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDX4O14627 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDX4O14627 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDX4O14627 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.97■□□□□ 0.63
CDX4O14627 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDX4O14627 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.96■□□□□ 0.63
CDX4O14627 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDX4O14627 PLK5-205ENST00000642079 1969 ntBASIC18.96■□□□□ 0.63
CDX4O14627 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDX4O14627 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.96■□□□□ 0.63
CDX4O14627 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDX4O14627 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDX4O14627 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.96■□□□□ 0.63
CDX4O14627 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDX4O14627 FDX1P1-201ENST00000449115 551 ntBASIC18.96■□□□□ 0.63
CDX4O14627 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.96■□□□□ 0.63
CDX4O14627 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.96■□□□□ 0.63
CDX4O14627 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.96■□□□□ 0.63
CDX4O14627 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.96■□□□□ 0.63
CDX4O14627 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CDX4O14627 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.96■□□□□ 0.63
CDX4O14627 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDX4O14627 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDX4O14627 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms