Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3D1O14617 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.34■□□□□ 0.53
AP3D1O14617 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3D1O14617 LETM1P2-201ENST00000597330 2178 ntBASIC18.34■□□□□ 0.53
AP3D1O14617 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.33■□□□□ 0.53
AP3D1O14617 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP3D1O14617 KRT8P20-201ENST00000423953 1409 ntBASIC18.33■□□□□ 0.53
AP3D1O14617 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
AP3D1O14617 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
AP3D1O14617 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP3D1O14617 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.33■□□□□ 0.53
AP3D1O14617 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP3D1O14617 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3D1O14617 LSM12P1-201ENST00000411836 588 ntBASIC18.33■□□□□ 0.52
AP3D1O14617 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.33■□□□□ 0.52
AP3D1O14617 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3D1O14617 AL031963.3-201ENST00000606441 850 ntBASIC18.33■□□□□ 0.52
AP3D1O14617 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3D1O14617 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
AP3D1O14617 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.33■□□□□ 0.52
AP3D1O14617 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3D1O14617 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3D1O14617 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP3D1O14617 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3D1O14617 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP3D1O14617 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3D1O14617 AC116562.4-201ENST00000641316 2276 ntBASIC18.32■□□□□ 0.52
AP3D1O14617 BX276092.2-201ENST00000417668 665 ntBASIC18.32■□□□□ 0.52
AP3D1O14617 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.32■□□□□ 0.52
AP3D1O14617 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.32■□□□□ 0.52
AP3D1O14617 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP3D1O14617 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
AP3D1O14617 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3D1O14617 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3D1O14617 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3D1O14617 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.32■□□□□ 0.52
AP3D1O14617 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
AP3D1O14617 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3D1O14617 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.32■□□□□ 0.52
AP3D1O14617 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3D1O14617 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3D1O14617 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3D1O14617 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.31■□□□□ 0.52
AP3D1O14617 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.31■□□□□ 0.52
AP3D1O14617 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3D1O14617 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
AP3D1O14617 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3D1O14617 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3D1O14617 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3D1O14617 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3D1O14617 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3D1O14617 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
AP3D1O14617 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3D1O14617 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
AP3D1O14617 AC083906.2-201ENST00000511578 360 ntBASIC18.31■□□□□ 0.52
AP3D1O14617 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.31■□□□□ 0.52
AP3D1O14617 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
AP3D1O14617 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.31■□□□□ 0.52
AP3D1O14617 C2orf69P4-201ENST00000565394 541 ntBASIC18.31■□□□□ 0.52
AP3D1O14617 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.31■□□□□ 0.52
AP3D1O14617 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.31■□□□□ 0.52
AP3D1O14617 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
AP3D1O14617 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3D1O14617 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3D1O14617 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3D1O14617 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3D1O14617 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.31■□□□□ 0.52
AP3D1O14617 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3D1O14617 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3D1O14617 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
AP3D1O14617 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.3■□□□□ 0.52
AP3D1O14617 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3D1O14617 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
AP3D1O14617 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3D1O14617 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3D1O14617 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.3■□□□□ 0.52
AP3D1O14617 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3D1O14617 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3D1O14617 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3D1O14617 HLA-G-202ENST00000376815 851 ntBASIC18.3■□□□□ 0.52
AP3D1O14617 HLA-G-203ENST00000376818 1127 ntBASIC18.3■□□□□ 0.52
AP3D1O14617 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3D1O14617 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.3■□□□□ 0.52
AP3D1O14617 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3D1O14617 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3D1O14617 AL121832.2-201ENST00000610979 668 ntBASIC18.3■□□□□ 0.52
AP3D1O14617 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.3■□□□□ 0.52
AP3D1O14617 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3D1O14617 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3D1O14617 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3D1O14617 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
AP3D1O14617 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3D1O14617 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.3■□□□□ 0.52
AP3D1O14617 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
AP3D1O14617 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3D1O14617 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.29■□□□□ 0.52
AP3D1O14617 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3D1O14617 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP3D1O14617 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.29■□□□□ 0.52
AP3D1O14617 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms