Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 AC016405.3-201ENST00000607710 860 ntBASIC20.3■□□□□ 0.84
SRRM3A6NNA2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.3■□□□□ 0.84
SRRM3A6NNA2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 TERF1P5-201ENST00000477545 1207 ntBASIC20.29■□□□□ 0.84
SRRM3A6NNA2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRRM3A6NNA2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 Z99916.2-201ENST00000604037 246 ntBASIC20.28■□□□□ 0.84
SRRM3A6NNA2 FAM197Y4-202ENST00000622692 608 ntBASIC20.28■□□□□ 0.84
SRRM3A6NNA2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 AC055733.4-201ENST00000638462 1354 ntBASIC20.28■□□□□ 0.84
SRRM3A6NNA2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SRRM3A6NNA2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 KRT18P20-201ENST00000548986 1279 ntBASIC20.27■□□□□ 0.84
SRRM3A6NNA2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 AC069236.1-201ENST00000604339 616 ntBASIC20.27■□□□□ 0.84
SRRM3A6NNA2 AL445228.2-201ENST00000605589 952 ntBASIC20.27■□□□□ 0.84
SRRM3A6NNA2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRRM3A6NNA2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SRRM3A6NNA2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SRRM3A6NNA2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.27■□□□□ 0.83
SRRM3A6NNA2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms