Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC29.17■■■□□ 2.26
HFM1A2PYH4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC29.17■■■□□ 2.26
HFM1A2PYH4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC29.17■■■□□ 2.26
HFM1A2PYH4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
HFM1A2PYH4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
HFM1A2PYH4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
HFM1A2PYH4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
HFM1A2PYH4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC29.16■■■□□ 2.26
HFM1A2PYH4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC29.16■■■□□ 2.26
HFM1A2PYH4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC29.16■■■□□ 2.26
HFM1A2PYH4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
HFM1A2PYH4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
HFM1A2PYH4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
HFM1A2PYH4 GXYLT1P3-201ENST00000453058 1193 ntBASIC29.16■■■□□ 2.26
HFM1A2PYH4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC29.16■■■□□ 2.26
HFM1A2PYH4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC29.16■■■□□ 2.26
HFM1A2PYH4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC29.16■■■□□ 2.26
HFM1A2PYH4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC29.16■■■□□ 2.26
HFM1A2PYH4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC29.16■■■□□ 2.26
HFM1A2PYH4 CR392000.1-201ENST00000624770 1228 ntBASIC29.16■■■□□ 2.26
HFM1A2PYH4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC29.16■■■□□ 2.26
HFM1A2PYH4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
HFM1A2PYH4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
HFM1A2PYH4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
HFM1A2PYH4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
HFM1A2PYH4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
HFM1A2PYH4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC29.15■■■□□ 2.26
HFM1A2PYH4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
HFM1A2PYH4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
HFM1A2PYH4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC29.15■■■□□ 2.26
HFM1A2PYH4 RBM17P1-201ENST00000453646 1190 ntBASIC29.15■■■□□ 2.26
HFM1A2PYH4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
HFM1A2PYH4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
HFM1A2PYH4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
HFM1A2PYH4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
HFM1A2PYH4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
HFM1A2PYH4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC29.15■■■□□ 2.26
HFM1A2PYH4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
HFM1A2PYH4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC29.15■■■□□ 2.26
HFM1A2PYH4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
HFM1A2PYH4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
HFM1A2PYH4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
HFM1A2PYH4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC29.14■■■□□ 2.26
HFM1A2PYH4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
HFM1A2PYH4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
HFM1A2PYH4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
HFM1A2PYH4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
HFM1A2PYH4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC29.14■■■□□ 2.26
HFM1A2PYH4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC29.14■■■□□ 2.26
HFM1A2PYH4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
HFM1A2PYH4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC29.14■■■□□ 2.26
HFM1A2PYH4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
HFM1A2PYH4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC29.14■■■□□ 2.26
HFM1A2PYH4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC29.14■■■□□ 2.26
HFM1A2PYH4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
HFM1A2PYH4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
HFM1A2PYH4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
HFM1A2PYH4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC29.14■■■□□ 2.26
HFM1A2PYH4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC29.14■■■□□ 2.26
HFM1A2PYH4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC29.14■■■□□ 2.26
HFM1A2PYH4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.25
HFM1A2PYH4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
HFM1A2PYH4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
HFM1A2PYH4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC29.13■■■□□ 2.25
HFM1A2PYH4 B3GAT3P1-201ENST00000471720 806 ntBASIC29.13■■■□□ 2.25
HFM1A2PYH4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC29.13■■■□□ 2.25
HFM1A2PYH4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC29.13■■■□□ 2.25
HFM1A2PYH4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC29.13■■■□□ 2.25
HFM1A2PYH4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC29.13■■■□□ 2.25
HFM1A2PYH4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
HFM1A2PYH4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC29.13■■■□□ 2.25
HFM1A2PYH4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
HFM1A2PYH4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
HFM1A2PYH4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC29.12■■■□□ 2.25
HFM1A2PYH4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
HFM1A2PYH4 AL031985.4-201ENST00000642138 673 ntBASIC29.12■■■□□ 2.25
HFM1A2PYH4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
HFM1A2PYH4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC29.12■■■□□ 2.25
HFM1A2PYH4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
HFM1A2PYH4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
HFM1A2PYH4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC29.12■■■□□ 2.25
HFM1A2PYH4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
HFM1A2PYH4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
HFM1A2PYH4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
HFM1A2PYH4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
HFM1A2PYH4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
HFM1A2PYH4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC29.11■■■□□ 2.25
HFM1A2PYH4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC29.11■■■□□ 2.25
HFM1A2PYH4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC29.11■■■□□ 2.25
HFM1A2PYH4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
HFM1A2PYH4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
HFM1A2PYH4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
HFM1A2PYH4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
HFM1A2PYH4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
HFM1A2PYH4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC29.11■■■□□ 2.25
HFM1A2PYH4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
HFM1A2PYH4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC29.11■■■□□ 2.25
HFM1A2PYH4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
HFM1A2PYH4 AC079598.2-202ENST00000546624 1451 ntBASIC29.11■■■□□ 2.25
HFM1A2PYH4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC29.11■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms