Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV4A0A0B4J268 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TRAV4A0A0B4J268 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV4A0A0B4J268 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TRAV4A0A0B4J268 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV4A0A0B4J268 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV4A0A0B4J268 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV4A0A0B4J268 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV4A0A0B4J268 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV4A0A0B4J268 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV4A0A0B4J268 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV4A0A0B4J268 PHGDH-210ENST00000641115 1638 ntBASIC14.15□□□□□ -0.14
TRAV4A0A0B4J268 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 GPX1P1-201ENST00000388829 606 ntBASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 CROCCP5-201ENST00000436658 830 ntBASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV4A0A0B4J268 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 SLC29A4P1-201ENST00000398760 971 ntBASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV4A0A0B4J268 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 AL390719.1-204ENST00000412397 1219 ntBASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms