Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 NBPF21P-201ENST00000425093 1451 ntBASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 PRORSD1P-201ENST00000295112 541 ntBASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 YBX1P10-201ENST00000444752 975 ntBASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 RPPH1-201ENST00000516869 333 ntBASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 FAM197Y4-202ENST00000622692 608 ntBASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV41A0A0B4J266 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
TRAV41A0A0B4J266 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV41A0A0B4J266 AC073130.3-201ENST00000624389 2278 ntBASIC15.46■□□□□ 0.06
TRAV41A0A0B4J266 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV41A0A0B4J266 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 AC142381.4-202ENST00000563973 229 ntBASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 AC004264.1-201ENST00000608354 794 ntBASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 AC124016.1-201ENST00000609552 612 ntBASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRAV41A0A0B4J266 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV41A0A0B4J266 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV41A0A0B4J266 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRAV41A0A0B4J266 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV41A0A0B4J266 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms