Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 AC026271.3-201ENST00000571884 352 ntBASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 AC079598.2-202ENST00000546624 1451 ntBASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 FSCN1P1-201ENST00000568912 1481 ntBASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 MIR1238-201ENST00000408483 83 ntBASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV5A0A0B4J1U4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.61■□□□□ 0.41
TRGV5A0A0B4J1U4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 AC004980.1-204ENST00000429707 299 ntBASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 MIR6786-201ENST00000616843 113 ntBASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 AC097493.4-201ENST00000641197 219 ntBASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 KRT8P8-201ENST00000434750 1448 ntBASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRGV5A0A0B4J1U4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.59■□□□□ 0.41
TRGV5A0A0B4J1U4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TRGV5A0A0B4J1U4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.59■□□□□ 0.41
TRGV5A0A0B4J1U4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms