Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHOX2BQ99453 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHOX2BQ99453 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHOX2BQ99453 EEF1A1P5-201ENST00000436459 1389 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PHOX2BQ99453 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHOX2BQ99453 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 RBMX2P2-201ENST00000257020 946 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 Y_RNA.128-201ENST00000363391 112 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 RN7SKP239-201ENST00000364814 295 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHOX2BQ99453 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 RNU1-39P-201ENST00000383897 165 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 RNA5SP122-201ENST00000384457 108 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC092642.1-201ENST00000392417 425 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 FGFR1OP2P1-201ENST00000395943 500 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 TXNP7-201ENST00000406296 293 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 SOD1P1-201ENST00000407803 440 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 AL450338.1-201ENST00000407987 512 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 AL359704.1-201ENST00000411586 781 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 RPL17P49-201ENST00000443728 411 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 AL356133.1-201ENST00000444762 372 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 AL109809.3-201ENST00000456875 246 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC093166.4-201ENST00000457867 318 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 ST13P14-201ENST00000474095 734 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 SNRPCP11-201ENST00000492453 205 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 RNU6-150P-201ENST00000516237 95 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 RNU6-1003P-201ENST00000517099 105 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 THAP2-202ENST00000547843 672 ntTSL 2 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC093012.1-202ENST00000549403 582 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHOX2BQ99453 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC060766.2-201ENST00000588235 334 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC006116.10-201ENST00000591836 581 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC090948.1-201ENST00000607464 549 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 RNU6-87P-201ENST00000607561 108 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC012510.1-201ENST00000607946 759 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 pRNA.9-201ENST00000618609 89 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC090971.5-201ENST00000621102 293 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC006453.3-201ENST00000635891 377 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 AC243725.1-201ENST00000637164 436 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHOX2BQ99453 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHOX2BQ99453 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PHOX2BQ99453 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHOX2BQ99453 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 HDAC1P1-201ENST00000455482 1445 ntBASIC8.12□□□□□ -1.11
PHOX2BQ99453 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.12□□□□□ -1.11
PHOX2BQ99453 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.11□□□□□ -1.11
PHOX2BQ99453 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
PHOX2BQ99453 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
PHOX2BQ99453 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PHOX2BQ99453 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PHOX2BQ99453 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC8.11□□□□□ -1.11
PHOX2BQ99453 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
PHOX2BQ99453 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PHOX2BQ99453 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC8.11□□□□□ -1.11
PHOX2BQ99453 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
PHOX2BQ99453 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC8.11□□□□□ -1.11
PHOX2BQ99453 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PHOX2BQ99453 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PHOX2BQ99453 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PHOX2BQ99453 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PHOX2BQ99453 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC8.11□□□□□ -1.11
PHOX2BQ99453 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
PHOX2BQ99453 Y_RNA.145-201ENST00000363527 102 ntBASIC8.11□□□□□ -1.11
PHOX2BQ99453 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PHOX2BQ99453 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PHOX2BQ99453 SNORA57.2-201ENST00000391265 128 ntBASIC8.11□□□□□ -1.11
PHOX2BQ99453 MIR548P-201ENST00000408336 84 ntBASIC8.11□□□□□ -1.11
PHOX2BQ99453 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC8.11□□□□□ -1.11
PHOX2BQ99453 AC009161.1-201ENST00000417306 376 ntBASIC8.11□□□□□ -1.11
PHOX2BQ99453 AC011753.4-201ENST00000417974 311 ntBASIC8.11□□□□□ -1.11
PHOX2BQ99453 AL359633.1-201ENST00000421403 310 ntBASIC8.11□□□□□ -1.11
PHOX2BQ99453 AL353193.1-201ENST00000421444 268 ntBASIC8.11□□□□□ -1.11
PHOX2BQ99453 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms