Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 AL513533.1-201ENST00000453728 415 ntBASIC5.14□□□□□ -1.59
CHD8Q9HCK8 AP001781.1-201ENST00000530977 207 ntBASIC5.14□□□□□ -1.59
CHD8Q9HCK8 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 OR4A40P-201ENST00000533878 948 ntBASIC5.14□□□□□ -1.59
CHD8Q9HCK8 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 AC092821.3-202ENST00000641304 2767 ntBASIC5.14□□□□□ -1.59
CHD8Q9HCK8 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 MTCO1P15-201ENST00000529569 1526 ntBASIC5.14□□□□□ -1.59
CHD8Q9HCK8 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 SNORA73.1-201ENST00000363107 205 ntBASIC5.14□□□□□ -1.59
CHD8Q9HCK8 MRPS21P2-201ENST00000424704 264 ntBASIC5.14□□□□□ -1.59
CHD8Q9HCK8 CENPIP1-201ENST00000425713 902 ntBASIC5.14□□□□□ -1.59
CHD8Q9HCK8 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 H3F3BP1-201ENST00000440551 403 ntBASIC5.14□□□□□ -1.59
CHD8Q9HCK8 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.14□□□□□ -1.59
CHD8Q9HCK8 AC004232.3-201ENST00000622977 525 ntBASIC5.14□□□□□ -1.59
CHD8Q9HCK8 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 DHX40P1-201ENST00000588725 1412 ntBASIC5.14□□□□□ -1.59
CHD8Q9HCK8 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHD8Q9HCK8 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 RNU11-6P-201ENST00000391127 133 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 KNOP1P3-201ENST00000446933 426 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 RN7SL870P-201ENST00000460111 296 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 AC010618.1-201ENST00000469924 477 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 RPL38P3-201ENST00000484463 213 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 AC126615.2-201ENST00000553003 515 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 MIR3158-1-201ENST00000583596 81 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 AC011944.2-201ENST00000624440 683 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 CCT8P1-201ENST00000413611 1657 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 MAPK10-377ENST00000642006 2752 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 CLCA3P-203ENST00000490028 2781 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 AL603766.1-201ENST00000407763 664 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 AL603882.1-201ENST00000463059 681 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 NPM1P27-201ENST00000502784 830 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 CCDC11P1-201ENST00000503137 1162 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 SKA2-207ENST00000583380 583 ntTSL 5 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 AL121768.1-201ENST00000613917 2544 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 UG0898H09-202ENST00000623646 7040 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 AC120036.2-201ENST00000509729 1474 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 PWAR1-201ENST00000624188 2414 ntBASIC5.13□□□□□ -1.59
CHD8Q9HCK8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHD8Q9HCK8 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 UBE2V1P14-201ENST00000415815 558 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms