Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
CHRNA3P32297 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHRNA3P32297 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHRNA3P32297 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.92□□□□□ -1.46
CHRNA3P32297 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CHRNA3P32297 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.92□□□□□ -1.46
CHRNA3P32297 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHRNA3P32297 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHRNA3P32297 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA3P32297 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA3P32297 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.91□□□□□ -1.46
CHRNA3P32297 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA3P32297 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.91□□□□□ -1.46
CHRNA3P32297 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.91□□□□□ -1.46
CHRNA3P32297 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA3P32297 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
CHRNA3P32297 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CHRNA3P32297 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CHRNA3P32297 RNA5SP326-201ENST00000363209 110 ntBASIC5.91□□□□□ -1.46
CHRNA3P32297 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CHRNA3P32297 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CHRNA3P32297 AL512422.1-201ENST00000407033 553 ntBASIC5.91□□□□□ -1.46
CHRNA3P32297 RN7SKP206-201ENST00000410823 293 ntBASIC5.91□□□□□ -1.46
CHRNA3P32297 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.91□□□□□ -1.46
CHRNA3P32297 RPL5P25-201ENST00000441148 775 ntBASIC5.91□□□□□ -1.46
CHRNA3P32297 AC064862.4-201ENST00000442180 334 ntBASIC5.91□□□□□ -1.46
CHRNA3P32297 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.91□□□□□ -1.46
CHRNA3P32297 ABCC13-202ENST00000463099 3842 ntBASIC5.91□□□□□ -1.46
CHRNA3P32297 PSAT1P4-201ENST00000466500 526 ntBASIC5.91□□□□□ -1.46
CHRNA3P32297 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA3P32297 RN7SL101P-201ENST00000496350 279 ntBASIC5.91□□□□□ -1.46
CHRNA3P32297 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.91□□□□□ -1.46
CHRNA3P32297 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.91□□□□□ -1.46
CHRNA3P32297 CYCSP22-201ENST00000517555 339 ntBASIC5.91□□□□□ -1.46
CHRNA3P32297 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.91□□□□□ -1.46
CHRNA3P32297 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.91□□□□□ -1.46
CHRNA3P32297 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
CHRNA3P32297 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.91□□□□□ -1.46
CHRNA3P32297 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.91□□□□□ -1.46
CHRNA3P32297 AC015802.2-201ENST00000589690 189 ntBASIC5.91□□□□□ -1.46
CHRNA3P32297 AC010632.3-201ENST00000611377 369 ntBASIC5.91□□□□□ -1.46
CHRNA3P32297 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.91□□□□□ -1.46
CHRNA3P32297 MIR4302-201ENST00000638058 60 ntBASIC5.91□□□□□ -1.46
CHRNA3P32297 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.91□□□□□ -1.46
CHRNA3P32297 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA3P32297 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA3P32297 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA3P32297 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.91□□□□□ -1.46
CHRNA3P32297 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA3P32297 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.91□□□□□ -1.46
CHRNA3P32297 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA3P32297 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA3P32297 AL513548.1-201ENST00000562904 1724 ntBASIC5.91□□□□□ -1.46
CHRNA3P32297 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CHRNA3P32297 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.91□□□□□ -1.46
CHRNA3P32297 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.91□□□□□ -1.46
CHRNA3P32297 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.9□□□□□ -1.46
CHRNA3P32297 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.9□□□□□ -1.46
CHRNA3P32297 CR382285.2-201ENST00000624662 1495 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHRNA3P32297 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CHRNA3P32297 AL442128.2-201ENST00000620246 1824 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CHRNA3P32297 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.9□□□□□ -1.46
CHRNA3P32297 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHRNA3P32297 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHRNA3P32297 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.9□□□□□ -1.46
CHRNA3P32297 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHRNA3P32297 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CHRNA3P32297 SDHDP6-201ENST00000414693 480 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 NIFKP3-201ENST00000417799 865 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.9□□□□□ -1.46
CHRNA3P32297 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.9□□□□□ -1.46
CHRNA3P32297 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CHRNA3P32297 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.9□□□□□ -1.46
CHRNA3P32297 NFYAP1-201ENST00000431953 972 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 NDUFB4P8-201ENST00000435351 367 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 GAPDHP48-201ENST00000436626 961 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 SUMO2P3-201ENST00000438311 288 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.9□□□□□ -1.46
CHRNA3P32297 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.9□□□□□ -1.46
CHRNA3P32297 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.9□□□□□ -1.46
CHRNA3P32297 CBX1P2-201ENST00000453841 458 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 RPL5P16-201ENST00000471467 790 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 RN7SL174P-201ENST00000475578 289 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.9□□□□□ -1.46
CHRNA3P32297 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.9□□□□□ -1.46
CHRNA3P32297 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.9□□□□□ -1.46
CHRNA3P32297 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.9□□□□□ -1.46
CHRNA3P32297 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.9□□□□□ -1.46
CHRNA3P32297 AGGF1P7-201ENST00000562369 913 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CHRNA3P32297 AC096996.1-201ENST00000563813 325 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 MIR4260-201ENST00000583107 67 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 MIR7853-201ENST00000584820 132 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 AC011445.2-201ENST00000599274 173 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.9□□□□□ -1.46
CHRNA3P32297 RN7SL787P-201ENST00000613000 284 ntBASIC5.9□□□□□ -1.46
CHRNA3P32297 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms