Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC012213.4-201ENST00000606457 354 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VRK3Q8IV63 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AC005725.1-201ENST00000577346 2607 ntBASIC5.99□□□□□ -1.45
VRK3Q8IV63 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
VRK3Q8IV63 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VRK3Q8IV63 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VRK3Q8IV63 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
VRK3Q8IV63 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VRK3Q8IV63 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VRK3Q8IV63 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VRK3Q8IV63 CASC19-238ENST00000641523 1558 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 AL354854.1-201ENST00000455940 1363 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VRK3Q8IV63 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
VRK3Q8IV63 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 AL132875.1-201ENST00000403623 949 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC241520.1-201ENST00000422654 1099 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 IGLV3-4-201ENST00000432300 244 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC010153.1-201ENST00000432862 727 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 VN1R25P-201ENST00000443385 738 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 RPL5P7-201ENST00000444235 813 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 ELOCP30-201ENST00000447108 299 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VRK3Q8IV63 C1DP3-201ENST00000455013 423 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC093663.2-201ENST00000484625 313 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 HMGB1P38-201ENST00000490557 577 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC008494.2-201ENST00000514544 370 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC021146.10-201ENST00000515628 706 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 RNA5SP473-201ENST00000516402 125 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC023310.2-201ENST00000553844 547 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC090651.1-201ENST00000567865 634 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 AL022067.1-201ENST00000602426 454 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC108865.2-201ENST00000606881 432 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC004775.1-201ENST00000607389 753 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AL590410.1-201ENST00000617925 333 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC105105.5-201ENST00000622635 1294 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 AC093875.1-201ENST00000623688 504 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 AP002833.3-201ENST00000625075 2265 ntBASIC5.98□□□□□ -1.45
VRK3Q8IV63 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
VRK3Q8IV63 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VRK3Q8IV63 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
VRK3Q8IV63 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
VRK3Q8IV63 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VRK3Q8IV63 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VRK3Q8IV63 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VRK3Q8IV63 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VRK3Q8IV63 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VRK3Q8IV63 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 RNU1-134P-201ENST00000362935 165 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms