RNA–Protein interactions for RNA: ENST00000636071.2

SCN2A-209, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,881 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-209ENST00000636071 PELP1Q8IZL8 1130 aaKnown RBP10.65□□□□□ -0.7
SCN2A-209ENST00000636071 MYT1Q01538 1121 aa10.29□□□□□ -0.76
SCN2A-209ENST00000636071 CCER1Q8TC90 406 aaPredicted RBP10.1□□□□□ -0.79
SCN2A-209ENST00000636071 FAM9AQ8IZU1 332 aaPredicted RBP9.96□□□□□ -0.81
SCN2A-209ENST00000636071 DCAF8L2P0C7V8 631 aa9.91□□□□□ -0.82
SCN2A-209ENST00000636071 YTHDC1Q96MU7 727 aaKnown RBP9.85□□□□□ -0.83
SCN2A-209ENST00000636071 ZEB1P37275 1124 aaPredicted RBP9.84□□□□□ -0.83
SCN2A-209ENST00000636071 APLP2Q06481 763 aa9.84□□□□□ -0.83
SCN2A-209ENST00000636071 CENPBP07199 599 aaPredicted RBP9.83□□□□□ -0.84
SCN2A-209ENST00000636071 ERICH6Q7L0X2 663 aa9.81□□□□□ -0.84
SCN2A-209ENST00000636071 NEFLP07196 543 aa9.61□□□□□ -0.87
SCN2A-209ENST00000636071 NISCHQ9Y2I1 1504 aa9.55□□□□□ -0.88
SCN2A-209ENST00000636071 SUPT5HO00267 1087 aaKnown RBP9.54□□□□□ -0.88
SCN2A-209ENST00000636071 TTBK1Q5TCY1 1321 aaPredicted RBP9.45□□□□□ -0.9
SCN2A-209ENST00000636071 DAXXQ9UER7 740 aaPredicted RBP9.43□□□□□ -0.9
SCN2A-209ENST00000636071 RTL5Q5HYW3 569 aaPredicted RBP9.23□□□□□ -0.93
SCN2A-209ENST00000636071 PCGF6Q9BYE7 350 aa9.16□□□□□ -0.94
SCN2A-209ENST00000636071 MYT1LQ9UL68 1186 aa9.13□□□□□ -0.95
SCN2A-209ENST00000636071 ZNF316A6NFI3 1004 aaPredicted RBP9.13□□□□□ -0.95
SCN2A-209ENST00000636071 CLSPNQ9HAW4 1339 aa9.12□□□□□ -0.95
SCN2A-209ENST00000636071 TRIM41Q8WV44 630 aa9.12□□□□□ -0.95
SCN2A-209ENST00000636071 SHROOM4Q9ULL8 1493 aa9.09□□□□□ -0.95
SCN2A-209ENST00000636071 TRIM26Q12899 539 aaPredicted RBP9.06□□□□□ -0.96
SCN2A-209ENST00000636071 GLIPR1L2Q4G1C9 344 aa9.03□□□□□ -0.96
SCN2A-209ENST00000636071 UBTFP17480 764 aaKnown RBP9.02□□□□□ -0.97
SCN2A-209ENST00000636071 NEFMP07197 916 aa9.02□□□□□ -0.97
SCN2A-209ENST00000636071 ZBTB47Q9UFB7 747 aaPredicted RBP8.95□□□□□ -0.98
SCN2A-209ENST00000636071 ANP32BQ92688 251 aaKnown RBP8.92□□□□□ -0.98
SCN2A-209ENST00000636071 EHMT2Q96KQ7 1210 aa8.9□□□□□ -0.98
SCN2A-209ENST00000636071 HRCP23327 699 aa8.9□□□□□ -0.98
SCN2A-209ENST00000636071 ATP1B4Q9UN42 357 aaPredicted RBP8.9□□□□□ -0.98
SCN2A-209ENST00000636071 CDK11AQ9UQ88 783 aaPredicted RBP8.86□□□□□ -0.99
SCN2A-209ENST00000636071 EIF5BO60841 1220 aaKnown RBP8.82□□□□□ -1
SCN2A-209ENST00000636071 ACIN1Q9UKV3 1341 aaKnown RBP8.81□□□□□ -1
SCN2A-209ENST00000636071 ANP32AP39687 249 aaKnown RBP8.81□□□□□ -1
SCN2A-209ENST00000636071 ANP32EQ9BTT0 268 aa8.8□□□□□ -1
SCN2A-209ENST00000636071 ANP32CO43423 234 aa8.75□□□□□ -1.01
SCN2A-209ENST00000636071 UPF2Q9HAU5 1272 aaKnown RBP8.75□□□□□ -1.01
SCN2A-209ENST00000636071 DIEXFQ68CQ4 756 aaKnown RBP8.74□□□□□ -1.01
SCN2A-209ENST00000636071 RANGAP1P46060 587 aaPredicted RBP8.68□□□□□ -1.02
SCN2A-209ENST00000636071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.67□□□□□ -1.02
SCN2A-209ENST00000636071 CANXP27824 592 aaKnown RBP8.67□□□□□ -1.02
SCN2A-209ENST00000636071 HNRNPUL2Q1KMD3 747 aaKnown RBP8.67□□□□□ -1.02
SCN2A-209ENST00000636071 TNNT2P45379 298 aaPredicted RBP8.67□□□□□ -1.02
SCN2A-209ENST00000636071 POLR3GLQ9BT43 218 aa8.66□□□□□ -1.02
SCN2A-209ENST00000636071 TRIM44Q96DX7 344 aaPredicted RBP8.63□□□□□ -1.03
SCN2A-209ENST00000636071 CDK11BP21127 795 aaKnown RBP8.63□□□□□ -1.03
SCN2A-209ENST00000636071 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.62□□□□□ -1.03
SCN2A-209ENST00000636071 SLC4A1APQ9BWU0 796 aaKnown RBP8.61□□□□□ -1.03
SCN2A-209ENST00000636071 HSP90AA1P07900 732 aaKnown RBP8.6□□□□□ -1.03
SCN2A-209ENST00000636071 NCLP19338 710 aaKnown RBP8.58□□□□□ -1.04
SCN2A-209ENST00000636071 DDRGK1Q96HY6 314 aa8.56□□□□□ -1.04
SCN2A-209ENST00000636071 GOLGA6L22H0YM25 854 aa8.54□□□□□ -1.04
SCN2A-209ENST00000636071 BECN1Q14457 450 aa8.53□□□□□ -1.04
SCN2A-209ENST00000636071 ARID4BQ4LE39 1312 aaPredicted RBP8.52□□□□□ -1.05
SCN2A-209ENST00000636071 ITGAEP38570 1179 aa8.52□□□□□ -1.05
SCN2A-209ENST00000636071 TRIM52Q96A61 297 aa8.52□□□□□ -1.05
SCN2A-209ENST00000636071 NEUROD1Q13562 356 aa8.5□□□□□ -1.05
SCN2A-209ENST00000636071 L1TD1Q5T7N2 865 aaKnown RBP8.5□□□□□ -1.05
SCN2A-209ENST00000636071 ERICH6BQ5W0A0 696 aa8.49□□□□□ -1.05
SCN2A-209ENST00000636071 CHIC1Q5VXU3 224 aa8.49□□□□□ -1.05
SCN2A-209ENST00000636071 CHMP4BQ9H444 224 aaKnown RBP8.49□□□□□ -1.05
SCN2A-209ENST00000636071 NRDCO43847 1150 aa8.49□□□□□ -1.05
SCN2A-209ENST00000636071 GTF3C3Q9Y5Q9 886 aa8.49□□□□□ -1.05
SCN2A-209ENST00000636071 CFAP44Q96MT7 982 aa8.48□□□□□ -1.05
SCN2A-209ENST00000636071 MYH16Q9H6N6 1097 aa8.48□□□□□ -1.05
SCN2A-209ENST00000636071 FAM50AQ14320 339 aaKnown RBP8.48□□□□□ -1.05
SCN2A-209ENST00000636071 GOLGA6L6A8MZA4 724 aa8.47□□□□□ -1.05
SCN2A-209ENST00000636071 USP35Q9P2H5 1018 aa8.44□□□□□ -1.06
SCN2A-209ENST00000636071 SLC24A1O60721 1099 aa8.44□□□□□ -1.06
SCN2A-209ENST00000636071 PPM1GO15355 546 aaPredicted RBP8.43□□□□□ -1.06
SCN2A-209ENST00000636071 ZRSR1Q15695 479 aaKnown RBP8.43□□□□□ -1.06
SCN2A-209ENST00000636071 PTMSP20962 102 aa8.42□□□□□ -1.06
SCN2A-209ENST00000636071 TONSLQ96HA7 1378 aa8.42□□□□□ -1.06
SCN2A-209ENST00000636071 CASC1Q6TDU7 716 aa8.41□□□□□ -1.06
SCN2A-209ENST00000636071 DCAF1Q9Y4B6 1507 aa8.39□□□□□ -1.07
SCN2A-209ENST00000636071 MS4A1P11836 297 aa8.38□□□□□ -1.07
SCN2A-209ENST00000636071 CCDC136Q96JN2 1154 aa8.37□□□□□ -1.07
SCN2A-209ENST00000636071 CDCA8Q53HL2 280 aa8.37□□□□□ -1.07
SCN2A-209ENST00000636071 ESF1Q9H501 851 aaKnown RBP8.37□□□□□ -1.07
SCN2A-209ENST00000636071 CHAF1AQ13111 956 aaPredicted RBP8.36□□□□□ -1.07
SCN2A-209ENST00000636071 WDR43Q15061 677 aaKnown RBP eCLIP8.34□□□□□ -1.07
SCN2A-209ENST00000636071 HAP1P54257 671 aaPredicted RBP8.33□□□□□ -1.08
SCN2A-209ENST00000636071 NPM2Q86SE8 214 aaKnown RBP8.32□□□□□ -1.08
SCN2A-209ENST00000636071 BCANQ96GW7 911 aa8.31□□□□□ -1.08
SCN2A-209ENST00000636071 ZNF326Q5BKZ1 582 aaKnown RBP8.31□□□□□ -1.08
SCN2A-209ENST00000636071 EEA1Q15075 1411 aa8.3□□□□□ -1.08
SCN2A-209ENST00000636071 PTMAP06454 111 aaKnown RBP8.3□□□□□ -1.08
SCN2A-209ENST00000636071 TMC1Q8TDI8 760 aa8.3□□□□□ -1.08
SCN2A-209ENST00000636071 CHMP4AQ9BY43 222 aa8.3□□□□□ -1.08
SCN2A-209ENST00000636071 PPARGC1BQ86YN6 1023 aaKnown RBP8.29□□□□□ -1.08
SCN2A-209ENST00000636071 PNNQ9H307 717 aaKnown RBP8.28□□□□□ -1.08
SCN2A-209ENST00000636071 CFAP53Q96M91 514 aa8.27□□□□□ -1.08
SCN2A-209ENST00000636071 HNRNPUQ00839 825 aaKnown RBP eCLIP8.27□□□□□ -1.09
SCN2A-209ENST00000636071 FKBP8Q14318 412 aa8.27□□□□□ -1.09
SCN2A-209ENST00000636071 CNGB1Q14028 1251 aaPredicted RBP8.27□□□□□ -1.09
SCN2A-209ENST00000636071 CSRNP3Q8WYN3 585 aa8.25□□□□□ -1.09
SCN2A-209ENST00000636071 RSF1Q96T23 1441 aaPredicted RBP8.25□□□□□ -1.09
SCN2A-209ENST00000636071 CCDC34Q96HJ3 373 aa8.25□□□□□ -1.09
SCN2A-209ENST00000636071 HTATSF1O43719 755 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms