Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC007954.1-201ENST00000554198 494 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC026956.1-201ENST00000558741 396 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC091489.2-201ENST00000566263 604 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 ANP32BP1-202ENST00000568553 737 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 IGKV2OR2-1-201ENST00000605129 304 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC055764.2-201ENST00000610089 670 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 RN7SL261P-201ENST00000613441 282 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 CASC19-212ENST00000641153 1287 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 RN7SKP23-201ENST00000625159 4301 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 MTND5P11-201ENST00000511037 1812 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.7□□□□□ -1.02
RC3H1Q5TC82 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RC3H1Q5TC82 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 HSP90AB7P-201ENST00000450068 2454 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AL121657.1-201ENST00000327215 531 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 SNORD56.4-201ENST00000363883 71 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 RNU4-12P-201ENST00000365233 139 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 YWHAZP4-201ENST00000392459 708 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 RN7SKP240-201ENST00000410583 375 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 BTF3P8-201ENST00000414577 526 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 GLRXP1-201ENST00000423261 334 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 FABP5P1-201ENST00000423401 411 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 PAXBP1P1-201ENST00000449315 447 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AC244505.3-201ENST00000454598 187 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AC092989.1-201ENST00000481235 277 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AC096743.1-201ENST00000485172 319 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 HMGB1P3-201ENST00000502802 616 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 SETP21-201ENST00000514799 892 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 TRIM51DP-201ENST00000529746 596 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AC022832.1-201ENST00000530718 645 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AL589743.6-201ENST00000611025 117 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 RMST_10.1-201ENST00000616309 154 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AC015660.5-201ENST00000623238 564 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AC019080.5-201ENST00000624891 757 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AC127502.3-201ENST00000636170 1206 ntBASIC8.69□□□□□ -1.02
RC3H1Q5TC82 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RC3H1Q5TC82 AL121949.2-201ENST00000403446 1548 ntBASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms