Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 PMS2P3-207ENST00000529061 717 ntBASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 AC005341.1-201ENST00000571086 708 ntBASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 FAM3C2-201ENST00000312214 681 ntBASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 RNA5SP479-201ENST00000364858 117 ntBASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 AL009179.1-201ENST00000406085 265 ntBASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 GJA6P-201ENST00000415117 1042 ntBASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 AC007064.3-201ENST00000422608 359 ntBASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 VN1R21P-201ENST00000426703 765 ntBASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 DNAJC19P7-201ENST00000428811 344 ntBASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 AL590399.4-201ENST00000436561 601 ntBASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 NANOGP9-201ENST00000439890 892 ntBASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC8.85□□□□□ -0.99
SNAPC4Q5SXM2 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 RPL34P20-201ENST00000442771 351 ntBASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 NDUFA5P8-201ENST00000449019 346 ntBASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 AC011487.3-201ENST00000593607 453 ntBASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 AP003789.1-201ENST00000617737 605 ntBASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 UG0898H09-202ENST00000623646 7040 ntBASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.84□□□□□ -0.99
SNAPC4Q5SXM2 RNA5SP455-201ENST00000365190 119 ntBASIC8.83□□□□□ -1
SNAPC4Q5SXM2 CHEK2P3-201ENST00000416118 248 ntBASIC8.83□□□□□ -1
SNAPC4Q5SXM2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 RPS23P7-201ENST00000466210 444 ntBASIC8.83□□□□□ -1
SNAPC4Q5SXM2 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 AC006115.2-201ENST00000596823 202 ntBASIC8.83□□□□□ -1
SNAPC4Q5SXM2 AP000769.2-201ENST00000602344 396 ntBASIC8.83□□□□□ -1
SNAPC4Q5SXM2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 UBA3-213ENST00000631029 123 ntTSL 5 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 AC006206.1-201ENST00000544842 3387 ntBASIC8.83□□□□□ -1
SNAPC4Q5SXM2 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 AC007996.1-201ENST00000620414 2821 ntBASIC8.83□□□□□ -1
SNAPC4Q5SXM2 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms