Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
XPAP23025 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
XPAP23025 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.39□□□□□ -1.39
XPAP23025 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
XPAP23025 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
XPAP23025 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
XPAP23025 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
XPAP23025 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
XPAP23025 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
XPAP23025 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.38□□□□□ -1.39
XPAP23025 MIR513B-201ENST00000385136 84 ntBASIC6.38□□□□□ -1.39
XPAP23025 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.38□□□□□ -1.39
XPAP23025 TMA16P2-201ENST00000413187 601 ntBASIC6.38□□□□□ -1.39
XPAP23025 AC107081.1-201ENST00000414975 361 ntBASIC6.38□□□□□ -1.39
XPAP23025 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.38□□□□□ -1.39
XPAP23025 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.38□□□□□ -1.39
XPAP23025 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.38□□□□□ -1.39
XPAP23025 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.38□□□□□ -1.39
XPAP23025 VN1R25P-201ENST00000443385 738 ntBASIC6.38□□□□□ -1.39
XPAP23025 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.38□□□□□ -1.39
XPAP23025 SETD6P1-201ENST00000444575 317 ntBASIC6.38□□□□□ -1.39
XPAP23025 VPS25P1-201ENST00000455691 508 ntBASIC6.38□□□□□ -1.39
XPAP23025 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.38□□□□□ -1.39
XPAP23025 AC104339.1-201ENST00000465478 348 ntBASIC6.38□□□□□ -1.39
XPAP23025 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
XPAP23025 AC098583.1-201ENST00000480875 255 ntBASIC6.38□□□□□ -1.39
XPAP23025 OR9A1P-202ENST00000484361 945 ntBASIC6.38□□□□□ -1.39
XPAP23025 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.38□□□□□ -1.39
XPAP23025 SNX18P24-201ENST00000505249 671 ntBASIC6.38□□□□□ -1.39
XPAP23025 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 AC105313.1-201ENST00000509121 353 ntBASIC6.38□□□□□ -1.39
XPAP23025 MAST4-IT1-201ENST00000514241 658 ntBASIC6.38□□□□□ -1.39
XPAP23025 AC011853.1-201ENST00000518911 454 ntBASIC6.38□□□□□ -1.39
XPAP23025 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.38□□□□□ -1.39
XPAP23025 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.38□□□□□ -1.39
XPAP23025 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.38□□□□□ -1.39
XPAP23025 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.38□□□□□ -1.39
XPAP23025 AC084337.1-201ENST00000524809 686 ntBASIC6.38□□□□□ -1.39
XPAP23025 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.38□□□□□ -1.39
XPAP23025 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.38□□□□□ -1.39
XPAP23025 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.38□□□□□ -1.39
XPAP23025 AC009729.1-201ENST00000548873 1133 ntBASIC6.38□□□□□ -1.39
XPAP23025 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.38□□□□□ -1.39
XPAP23025 AC009097.3-201ENST00000563557 1018 ntBASIC6.38□□□□□ -1.39
XPAP23025 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.38□□□□□ -1.39
XPAP23025 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.38□□□□□ -1.39
XPAP23025 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.38□□□□□ -1.39
XPAP23025 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.38□□□□□ -1.39
XPAP23025 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.38□□□□□ -1.39
XPAP23025 AC005332.4-201ENST00000592752 579 ntBASIC6.38□□□□□ -1.39
XPAP23025 SMIM12P1-201ENST00000603004 274 ntBASIC6.38□□□□□ -1.39
XPAP23025 uc_338.31-201ENST00000615595 186 ntBASIC6.38□□□□□ -1.39
XPAP23025 AL591926.1-201ENST00000620542 217 ntBASIC6.38□□□□□ -1.39
XPAP23025 MIR7159-201ENST00000620587 66 ntBASIC6.38□□□□□ -1.39
XPAP23025 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.38□□□□□ -1.39
XPAP23025 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.38□□□□□ -1.39
XPAP23025 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.38□□□□□ -1.39
XPAP23025 MTND4P8-201ENST00000514997 1362 ntBASIC6.38□□□□□ -1.39
XPAP23025 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
XPAP23025 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.38□□□□□ -1.39
XPAP23025 MTND5P11-201ENST00000511037 1812 ntBASIC6.38□□□□□ -1.39
XPAP23025 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.38□□□□□ -1.39
XPAP23025 WBP11P1-201ENST00000562560 1931 ntBASIC6.38□□□□□ -1.39
XPAP23025 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 AL359715.3-201ENST00000569267 2123 ntBASIC6.38□□□□□ -1.39
XPAP23025 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.38□□□□□ -1.39
XPAP23025 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
XPAP23025 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.38□□□□□ -1.39
XPAP23025 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
XPAP23025 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.37□□□□□ -1.39
XPAP23025 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.37□□□□□ -1.39
XPAP23025 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.37□□□□□ -1.39
XPAP23025 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
XPAP23025 AKAP17BP-201ENST00000431706 2719 ntBASIC6.37□□□□□ -1.39
XPAP23025 AL136984.1-201ENST00000607611 1893 ntBASIC6.37□□□□□ -1.39
XPAP23025 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.37□□□□□ -1.39
XPAP23025 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.37□□□□□ -1.39
XPAP23025 CYP2G2P-201ENST00000594920 1485 ntBASIC6.37□□□□□ -1.39
XPAP23025 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
XPAP23025 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
XPAP23025 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
XPAP23025 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
XPAP23025 YWHAZP6-201ENST00000399764 738 ntBASIC6.37□□□□□ -1.39
XPAP23025 AL139805.1-201ENST00000407837 289 ntBASIC6.37□□□□□ -1.39
XPAP23025 RNU2-22P-201ENST00000411266 212 ntBASIC6.37□□□□□ -1.39
XPAP23025 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms