RNA–Protein interactions for RNA: ENST00000418764.2

AC004543.1-201, humanhuman

TSL 5 BASIC

Gene AC004543.1, Length 369 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004543.1-201ENST00000418764 AEBP2Q6ZN18 517 aaPredicted RBP27.92■■■□□ 2.06
AC004543.1-201ENST00000418764 CHIC1Q5VXU3 224 aa26.9■■□□□ 1.9
AC004543.1-201ENST00000418764 SENP3Q9H4L4 574 aaPredicted RBP23.75■■□□□ 1.39
AC004543.1-201ENST00000418764 PHF23Q9BUL5 403 aaPredicted RBP23.54■■□□□ 1.36
AC004543.1-201ENST00000418764 FOXD1Q16676 465 aa22.15■■□□□ 1.14
AC004543.1-201ENST00000418764 PLPPR3Q6T4P5 718 aa21.77■■□□□ 1.08
AC004543.1-201ENST00000418764 PPP6R1Q9UPN7 881 aa20.86■□□□□ 0.93
AC004543.1-201ENST00000418764 ADRA2BP18089 450 aa20.85■□□□□ 0.93
AC004543.1-201ENST00000418764 PIAS4Q8N2W9 510 aaPredicted RBP20.72■□□□□ 0.91
AC004543.1-201ENST00000418764 MSH5O43196 834 aa20.64■□□□□ 0.89
AC004543.1-201ENST00000418764 POTEDQ86YR6 584 aa20.14■□□□□ 0.81
AC004543.1-201ENST00000418764 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
AC004543.1-201ENST00000418764 PPP4R3CPQ6ZMV5 832 aa19.09■□□□□ 0.65
AC004543.1-201ENST00000418764 MAPK8IP2Q13387 824 aaPredicted RBP18.99■□□□□ 0.63
AC004543.1-201ENST00000418764 DMRT2Q9Y5R5 561 aa18.87■□□□□ 0.61
AC004543.1-201ENST00000418764 CNKSR2Q8WXI2 1034 aa18.66■□□□□ 0.58
AC004543.1-201ENST00000418764 NCBP3Q53F19 620 aaKnown RBP18.6■□□□□ 0.57
AC004543.1-201ENST00000418764 RNF216Q9NWF9 866 aaPredicted RBP18.37■□□□□ 0.53
AC004543.1-201ENST00000418764 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
AC004543.1-201ENST00000418764 KCNA4P22459 653 aa18.27■□□□□ 0.52
AC004543.1-201ENST00000418764 NPM3O75607 178 aaKnown RBP18.21■□□□□ 0.51
AC004543.1-201ENST00000418764 DCAF8L1A6NGE4 600 aa18.1■□□□□ 0.49
AC004543.1-201ENST00000418764 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.44
AC004543.1-201ENST00000418764 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
AC004543.1-201ENST00000418764 RNF39Q9H2S5 420 aa17.67■□□□□ 0.42
AC004543.1-201ENST00000418764 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.53■□□□□ 0.4
AC004543.1-201ENST00000418764 SLC4A1APQ9BWU0 796 aaKnown RBP17.4■□□□□ 0.38
AC004543.1-201ENST00000418764 C1QBPQ07021 282 aaKnown RBP17.36■□□□□ 0.37
AC004543.1-201ENST00000418764 SLC4A2P04920 1241 aa17.23■□□□□ 0.35
AC004543.1-201ENST00000418764 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
AC004543.1-201ENST00000418764 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
AC004543.1-201ENST00000418764 HNRNPUL2Q1KMD3 747 aaKnown RBP16.98■□□□□ 0.31
AC004543.1-201ENST00000418764 FOXD4L1Q9NU39 408 aa16.97■□□□□ 0.31
AC004543.1-201ENST00000418764 MYCNP04198 464 aaPredicted RBP16.91■□□□□ 0.3
AC004543.1-201ENST00000418764 APLP2Q06481 763 aa16.9■□□□□ 0.3
AC004543.1-201ENST00000418764 SAMD1Q6SPF0 538 aaPredicted RBP16.86■□□□□ 0.29
AC004543.1-201ENST00000418764 CAPN15O75808 1086 aa16.77■□□□□ 0.28
AC004543.1-201ENST00000418764 ZBTB22O15209 634 aa16.75■□□□□ 0.27
AC004543.1-201ENST00000418764 SPINK5Q9NQ38 1064 aaPredicted RBP16.74■□□□□ 0.27
AC004543.1-201ENST00000418764 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
AC004543.1-201ENST00000418764 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
AC004543.1-201ENST00000418764 DSG3P32926 999 aa16.56■□□□□ 0.24
AC004543.1-201ENST00000418764 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
AC004543.1-201ENST00000418764 CSRNP3Q8WYN3 585 aa16.44■□□□□ 0.22
AC004543.1-201ENST00000418764 ATXN8OSP0DMR3 200 aa16.43■□□□□ 0.22
AC004543.1-201ENST00000418764 ABCB7O75027 752 aa16.37■□□□□ 0.21
AC004543.1-201ENST00000418764 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
AC004543.1-201ENST00000418764 POLA2Q14181 598 aa16.25■□□□□ 0.19
AC004543.1-201ENST00000418764 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
AC004543.1-201ENST00000418764 RBM42Q9BTD8 480 aaKnown RBP15.86■□□□□ 0.13
AC004543.1-201ENST00000418764 FBLN2P98095 1184 aa15.85■□□□□ 0.13
AC004543.1-201ENST00000418764 POTEHQ6S545 545 aa15.76■□□□□ 0.11
AC004543.1-201ENST00000418764 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
AC004543.1-201ENST00000418764 MKRN4PQ13434 485 aaPredicted RBP15.64■□□□□ 0.09
AC004543.1-201ENST00000418764 SPDYE2BA6NHP3 402 aa15.55■□□□□ 0.08
AC004543.1-201ENST00000418764 SPDYE6P0CI01 402 aa15.55■□□□□ 0.08
AC004543.1-201ENST00000418764 SPDYE2Q495Y8 402 aa15.55■□□□□ 0.08
AC004543.1-201ENST00000418764 AKT1S1Q96B36 256 aa15.54■□□□□ 0.08
AC004543.1-201ENST00000418764 ZNF692Q9BU19 519 aaPredicted RBP15.43■□□□□ 0.06
AC004543.1-201ENST00000418764 CHRDL2Q6WN34 429 aa15.41■□□□□ 0.06
AC004543.1-201ENST00000418764 REM2Q8IYK8 340 aaPredicted RBP15.35■□□□□ 0.05
AC004543.1-201ENST00000418764 SSUH2Q9Y2M2 353 aa15.35■□□□□ 0.05
AC004543.1-201ENST00000418764 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
AC004543.1-201ENST00000418764 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
AC004543.1-201ENST00000418764 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
AC004543.1-201ENST00000418764 PITPNM1O00562 1244 aa15.17■□□□□ 0.02
AC004543.1-201ENST00000418764 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
AC004543.1-201ENST00000418764 PIP4P2Q8N4L2 257 aa15.08■□□□□ 0
AC004543.1-201ENST00000418764 FXR2P51116 673 aaKnown RBP eCLIP15□□□□□ -0.01
AC004543.1-201ENST00000418764 STAG3Q9UJ98 1225 aa14.96□□□□□ -0.01
AC004543.1-201ENST00000418764 FKBP8Q14318 412 aa14.94□□□□□ -0.02
AC004543.1-201ENST00000418764 PRR29P0C7W0 189 aa14.93□□□□□ -0.02
AC004543.1-201ENST00000418764 PROM2Q8N271 834 aa14.89□□□□□ -0.03
AC004543.1-201ENST00000418764 PRKAR2AP13861 404 aaKnown RBP14.81□□□□□ -0.04
AC004543.1-201ENST00000418764 SP7Q8TDD2 431 aaPredicted RBP14.8□□□□□ -0.04
AC004543.1-201ENST00000418764 HAX1O00165 279 aa14.73□□□□□ -0.05
AC004543.1-201ENST00000418764 CHADLQ6NUI6 762 aa14.69□□□□□ -0.06
AC004543.1-201ENST00000418764 EVX2Q03828 476 aa14.65□□□□□ -0.06
AC004543.1-201ENST00000418764 CREBZFQ9NS37 354 aa14.6□□□□□ -0.07
AC004543.1-201ENST00000418764 FBXO3Q9UK99 471 aa14.58□□□□□ -0.08
AC004543.1-201ENST00000418764 FARP1Q9Y4F1 1045 aaPredicted RBP14.57□□□□□ -0.08
AC004543.1-201ENST00000418764 PLEKHG5O94827 1062 aa14.55□□□□□ -0.08
AC004543.1-201ENST00000418764 C19orf67A6NJJ6 358 aa14.51□□□□□ -0.09
AC004543.1-201ENST00000418764 MIER1Q8N108 512 aa14.49□□□□□ -0.09
AC004543.1-201ENST00000418764 NPM1P06748 294 aaKnown RBP eCLIP14.46□□□□□ -0.09
AC004543.1-201ENST00000418764 PLCD3Q8N3E9 789 aa14.46□□□□□ -0.09
AC004543.1-201ENST00000418764 MNX1P50219 401 aaPredicted RBP14.39□□□□□ -0.11
AC004543.1-201ENST00000418764 ZBTB47Q9UFB7 747 aaPredicted RBP14.39□□□□□ -0.11
AC004543.1-201ENST00000418764 CD44P16070 742 aaKnown RBP14.38□□□□□ -0.11
AC004543.1-201ENST00000418764 PAK3O75914 559 aaPredicted RBP14.33□□□□□ -0.12
AC004543.1-201ENST00000418764 VASPP50552 380 aaPredicted RBP14.32□□□□□ -0.12
AC004543.1-201ENST00000418764 GABBR2O75899 941 aa14.27□□□□□ -0.13
AC004543.1-201ENST00000418764 ZRANB1Q9UGI0 708 aa14.25□□□□□ -0.13
AC004543.1-201ENST00000418764 CLCN6P51797 869 aa14.19□□□□□ -0.14
AC004543.1-201ENST00000418764 KLHL34Q8N239 644 aa14.18□□□□□ -0.14
AC004543.1-201ENST00000418764 ZNF579Q8NAF0 562 aaKnown RBP14.18□□□□□ -0.14
AC004543.1-201ENST00000418764 TSPYL2Q9H2G4 693 aaPredicted RBP14.14□□□□□ -0.15
AC004543.1-201ENST00000418764 RASEFQ8IZ41 740 aa14.11□□□□□ -0.15
AC004543.1-201ENST00000418764 NUBP1P53384 320 aa14.09□□□□□ -0.15
AC004543.1-201ENST00000418764 FAM212AQ96EL1 285 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms