Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.74□□□□□ -1.49
PCNAP12004 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCNAP12004 AC092868.3-201ENST00000560515 784 ntBASIC5.74□□□□□ -1.49
PCNAP12004 OR1E3-201ENST00000575608 948 ntBASIC5.74□□□□□ -1.49
PCNAP12004 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.74□□□□□ -1.49
PCNAP12004 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.74□□□□□ -1.49
PCNAP12004 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.74□□□□□ -1.49
PCNAP12004 AC098483.2-201ENST00000603158 454 ntBASIC5.74□□□□□ -1.49
PCNAP12004 HMGB1P51-201ENST00000605166 638 ntBASIC5.74□□□□□ -1.49
PCNAP12004 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.74□□□□□ -1.49
PCNAP12004 AC244100.4-201ENST00000617747 388 ntBASIC5.74□□□□□ -1.49
PCNAP12004 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.74□□□□□ -1.49
PCNAP12004 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.74□□□□□ -1.49
PCNAP12004 SNX18P12-201ENST00000624821 759 ntBASIC5.74□□□□□ -1.49
PCNAP12004 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PCNAP12004 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PCNAP12004 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCNAP12004 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.74□□□□□ -1.49
PCNAP12004 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCNAP12004 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCNAP12004 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCNAP12004 AC008627.1-201ENST00000517511 1704 ntBASIC5.74□□□□□ -1.49
PCNAP12004 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
PCNAP12004 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 GNL2P1-201ENST00000451274 2190 ntBASIC5.73□□□□□ -1.49
PCNAP12004 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PCNAP12004 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PCNAP12004 Z83820.1-201ENST00000456978 1499 ntBASIC5.73□□□□□ -1.49
PCNAP12004 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.73□□□□□ -1.49
PCNAP12004 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
PCNAP12004 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 MIR365B-201ENST00000362317 111 ntBASIC5.73□□□□□ -1.49
PCNAP12004 RN7SKP81-201ENST00000365603 331 ntBASIC5.73□□□□□ -1.49
PCNAP12004 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.73□□□□□ -1.49
PCNAP12004 EI24P3-201ENST00000399046 1062 ntBASIC5.73□□□□□ -1.49
PCNAP12004 AC002524.1-201ENST00000411687 547 ntBASIC5.73□□□□□ -1.49
PCNAP12004 AL356968.2-201ENST00000412769 1257 ntBASIC5.73□□□□□ -1.49
PCNAP12004 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.73□□□□□ -1.49
PCNAP12004 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.73□□□□□ -1.49
PCNAP12004 AC099677.3-201ENST00000427081 395 ntBASIC5.73□□□□□ -1.49
PCNAP12004 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.73□□□□□ -1.49
PCNAP12004 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.73□□□□□ -1.49
PCNAP12004 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.73□□□□□ -1.49
PCNAP12004 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.73□□□□□ -1.49
PCNAP12004 RPL31P20-201ENST00000449593 360 ntBASIC5.73□□□□□ -1.49
PCNAP12004 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.73□□□□□ -1.49
PCNAP12004 AC104339.1-201ENST00000465478 348 ntBASIC5.73□□□□□ -1.49
PCNAP12004 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.73□□□□□ -1.49
PCNAP12004 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.73□□□□□ -1.49
PCNAP12004 RNU6-491P-201ENST00000516099 110 ntBASIC5.73□□□□□ -1.49
PCNAP12004 RN7SKP35-201ENST00000517210 151 ntBASIC5.73□□□□□ -1.49
PCNAP12004 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.73□□□□□ -1.49
PCNAP12004 AP000859.1-201ENST00000525536 307 ntBASIC5.73□□□□□ -1.49
PCNAP12004 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.73□□□□□ -1.49
PCNAP12004 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.73□□□□□ -1.49
PCNAP12004 AC244502.2-201ENST00000543361 851 ntBASIC5.73□□□□□ -1.49
PCNAP12004 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.73□□□□□ -1.49
PCNAP12004 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.73□□□□□ -1.49
PCNAP12004 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.73□□□□□ -1.49
PCNAP12004 AC092332.1-201ENST00000563684 829 ntBASIC5.73□□□□□ -1.49
PCNAP12004 AC002519.2-203ENST00000567043 837 ntBASIC5.73□□□□□ -1.49
PCNAP12004 AC122134.1-202ENST00000569111 1201 ntBASIC5.73□□□□□ -1.49
PCNAP12004 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.73□□□□□ -1.49
PCNAP12004 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.73□□□□□ -1.49
PCNAP12004 AC012254.3-201ENST00000591183 2117 ntBASIC5.73□□□□□ -1.49
PCNAP12004 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 MIR6889-201ENST00000613185 59 ntBASIC5.73□□□□□ -1.49
PCNAP12004 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.73□□□□□ -1.49
PCNAP12004 AP006248.3-201ENST00000623580 594 ntBASIC5.73□□□□□ -1.49
PCNAP12004 CASC19-274ENST00000642018 970 ntBASIC5.73□□□□□ -1.49
PCNAP12004 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PCNAP12004 HSPD1P9-201ENST00000420325 1636 ntBASIC5.73□□□□□ -1.49
PCNAP12004 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 PSG10P-201ENST00000501199 1500 ntBASIC5.73□□□□□ -1.49
PCNAP12004 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.73□□□□□ -1.49
PCNAP12004 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCNAP12004 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.72□□□□□ -1.49
PCNAP12004 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PCNAP12004 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.72□□□□□ -1.49
PCNAP12004 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCNAP12004 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.72□□□□□ -1.49
PCNAP12004 CR382285.2-201ENST00000624662 1495 ntBASIC5.72□□□□□ -1.49
PCNAP12004 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
PCNAP12004 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCNAP12004 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCNAP12004 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCNAP12004 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.72□□□□□ -1.49
PCNAP12004 AL354854.1-201ENST00000455940 1363 ntBASIC5.72□□□□□ -1.49
PCNAP12004 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCNAP12004 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms