Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 Y_RNA.813-201ENST00000364639 102 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 RNA5SP238-201ENST00000365464 120 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 Y_RNA.582-201ENST00000391023 95 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 RNA5SP297-201ENST00000391029 113 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 PTMAP8-201ENST00000397729 342 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC003045.1-201ENST00000398779 713 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 VN1R33P-201ENST00000411800 887 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC092745.2-202ENST00000411880 369 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AL390840.1-201ENST00000420303 988 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 CDC42P6-201ENST00000421246 576 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 RBM22P7-201ENST00000421321 280 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 GSTA6P-201ENST00000424144 582 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 FDPSP1-201ENST00000424976 1071 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC000111.3-201ENST00000433478 193 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 UBE2V1P3-201ENST00000439651 417 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 RPSAP40-201ENST00000442343 891 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 RPS3AP17-201ENST00000472594 777 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC073522.1-201ENST00000483312 377 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 OR5H5P-201ENST00000503164 928 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 HMGB1P44-201ENST00000508597 572 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 OR51A1P-201ENST00000511110 946 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC135983.3-201ENST00000528049 1226 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 MIR5192-201ENST00000579892 92 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AL355333.1-201ENST00000605632 279 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC243830.2-201ENST00000618067 630 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 CLUHP10-201ENST00000631979 980 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 DDX50P1-201ENST00000438163 2400 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC106872.5-201ENST00000508856 1416 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC006116.1-201ENST00000587908 2171 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 RNU6-1339P-201ENST00000363574 91 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 Y_RNA.256-201ENST00000364594 104 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC231533.2-201ENST00000419045 978 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC093084.1-201ENST00000424233 687 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC233728.2-201ENST00000425348 757 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC104698.1-201ENST00000435671 276 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 ATP5G1P6-201ENST00000451206 412 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 PCMTD1P3-201ENST00000451824 472 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC117395.2-201ENST00000463122 1128 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC092989.1-201ENST00000481235 277 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 RN7SL314P-201ENST00000490735 292 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms