Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 BRD7P2-201ENST00000466133 1944 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AC084782.1-201ENST00000564401 2465 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AC006299.1-203ENST00000499625 2029 ntTSL 5 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 RNU2-17P-201ENST00000410290 190 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 RNA5SP178-201ENST00000410380 128 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 USP9YP27-201ENST00000418455 438 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 NANOGP4-201ENST00000427230 913 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 IGLV3-4-201ENST00000432300 244 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 RPL23AP19-201ENST00000436229 369 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AC016691.1-201ENST00000441321 413 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AL022237.1-201ENST00000446663 358 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AL050341.1-201ENST00000447743 313 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AL591363.1-201ENST00000450091 483 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 PPP1R8P1-201ENST00000452549 1044 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 SNORD42A-201ENST00000459584 64 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 RPL32P9-201ENST00000487963 407 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AC108078.1-201ENST00000508073 725 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AC079395.1-201ENST00000510981 262 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 RN7SKP11-201ENST00000517018 287 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 TRIM77BP-201ENST00000524985 1119 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AL359212.1-201ENST00000556608 614 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 RPL29P33-201ENST00000587474 316 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 RPSAP66-201ENST00000592196 606 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AL031281.2-201ENST00000606754 748 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AC114546.4-201ENST00000624413 369 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AC134503.1-201ENST00000633048 54 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AL590396.3-201ENST00000636334 300 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 RAP2C-205ENST00000620646 3341 ntTSL 5 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 DCAF13P1-201ENST00000495256 1330 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AL359694.2-201ENST00000567753 1615 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AC096745.2-201ENST00000627783 1914 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AP000542.3-201ENST00000623391 6114 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AL591222.1-201ENST00000568063 3844 ntBASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 KCNK2-202ENST00000391895 1410 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL25A1Q9BXS0 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 NOL11-201ENST00000253247 2947 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 MAPK10-371ENST00000641952 5209 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 MOBP-202ENST00000383754 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 SSX9-201ENST00000376909 591 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 RNU6-878P-201ENST00000384578 110 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 RNU6-297P-201ENST00000384636 107 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 MIR555-201ENST00000384987 96 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AL356432.1-201ENST00000405809 419 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AP000534.2-201ENST00000412729 568 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AC098592.2-201ENST00000413158 265 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms