Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.4□□□□□ -1.38
HERVK_113Q902F9 AC145423.1-201ENST00000605712 336 ntBASIC6.4□□□□□ -1.38
HERVK_113Q902F9 AC010245.2-201ENST00000606908 1167 ntBASIC6.4□□□□□ -1.38
HERVK_113Q902F9 AL445222.1-201ENST00000607259 628 ntBASIC6.4□□□□□ -1.38
HERVK_113Q902F9 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.4□□□□□ -1.38
HERVK_113Q902F9 AL121612.2-201ENST00000612261 482 ntBASIC6.4□□□□□ -1.38
HERVK_113Q902F9 AC006213.5-201ENST00000619673 288 ntBASIC6.4□□□□□ -1.38
HERVK_113Q902F9 AP000550.3-201ENST00000637734 379 ntBASIC6.4□□□□□ -1.38
HERVK_113Q902F9 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HERVK_113Q902F9 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
HERVK_113Q902F9 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.4□□□□□ -1.39
HERVK_113Q902F9 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.4□□□□□ -1.39
HERVK_113Q902F9 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
HERVK_113Q902F9 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.4□□□□□ -1.39
HERVK_113Q902F9 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
HERVK_113Q902F9 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HERVK_113Q902F9 BIN2P1-201ENST00000504996 1530 ntBASIC6.4□□□□□ -1.39
HERVK_113Q902F9 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HERVK_113Q902F9 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HERVK_113Q902F9 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 OLMALINC-203ENST00000641087 3779 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 RPS4XP5-201ENST00000419038 768 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 AL356806.1-201ENST00000422524 916 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 AC105918.1-201ENST00000474399 838 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 CBX1P5-201ENST00000475330 559 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 EIF1P7-201ENST00000487533 337 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 PCNAP1-201ENST00000505363 709 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 RNA5SP228-201ENST00000516232 133 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 MIR4260-201ENST00000583107 67 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 SUGT1P3-202ENST00000604259 383 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 HMGB1P51-201ENST00000605166 638 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 AL049539.1-201ENST00000611964 459 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 AC105105.5-201ENST00000622635 1294 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 AC112243.1-201ENST00000623949 3851 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 HDAC1P2-201ENST00000453661 1398 ntBASIC6.39□□□□□ -1.39
HERVK_113Q902F9 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.39□□□□□ -1.39
HERVK_113Q902F9 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 AC025470.1-201ENST00000510053 2032 ntBASIC6.38□□□□□ -1.39
HERVK_113Q902F9 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 AL662795.2-201ENST00000624252 3706 ntBASIC6.38□□□□□ -1.39
HERVK_113Q902F9 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 AC005042.1-201ENST00000393397 800 ntBASIC6.38□□□□□ -1.39
HERVK_113Q902F9 ST13P16-201ENST00000401760 781 ntBASIC6.38□□□□□ -1.39
HERVK_113Q902F9 AMZ2P2-201ENST00000406819 1057 ntBASIC6.38□□□□□ -1.39
HERVK_113Q902F9 RN7SKP273-201ENST00000411392 314 ntBASIC6.38□□□□□ -1.39
HERVK_113Q902F9 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 HMGA1P8-201ENST00000414130 321 ntBASIC6.38□□□□□ -1.39
HERVK_113Q902F9 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.38□□□□□ -1.39
HERVK_113Q902F9 AL034379.1-201ENST00000423216 253 ntBASIC6.38□□□□□ -1.39
HERVK_113Q902F9 AC113412.1-201ENST00000425840 504 ntBASIC6.38□□□□□ -1.39
HERVK_113Q902F9 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.38□□□□□ -1.39
HERVK_113Q902F9 MTCO1P45-201ENST00000431457 267 ntBASIC6.38□□□□□ -1.39
HERVK_113Q902F9 AL138787.1-202ENST00000437804 898 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms