Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC006070.1-201ENST00000508151 193 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 OR7E83P-201ENST00000511021 970 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 COX6B1P4-201ENST00000519826 484 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 TPM3P3-201ENST00000521343 354 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 OR7E161P-201ENST00000533722 967 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 AC092718.4-201ENST00000566639 716 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 AL589765.5-201ENST00000596133 515 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 AC113139.1-201ENST00000605049 239 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 AL844908.1-201ENST00000609953 652 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 RN7SL301P-202ENST00000618767 298 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 FKBP1AP4-201ENST00000631775 336 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 AC134503.1-201ENST00000633048 54 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 GLULP5-201ENST00000547831 1390 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 GBP5-201ENST00000370459 2011 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 PDE1A-203ENST00000409365 2034 ntTSL 5 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 AC008498.2-201ENST00000624033 2322 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 AL353795.1-201ENST00000439134 1775 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 AL022323.2-201ENST00000623239 3000 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 Y_RNA.138-201ENST00000363462 102 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 Y_RNA.474-201ENST00000384341 102 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 AC104297.1-201ENST00000393779 870 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 RN7SKP108-201ENST00000411367 328 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 ALDH7A1P4-201ENST00000412255 178 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 RPL26P29-201ENST00000415623 438 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 AL022324.2-201ENST00000434827 780 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 Z80107.2-201ENST00000445127 392 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 RPL7P12-201ENST00000446719 750 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 CEACAMP5-201ENST00000448037 961 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 NDUFA5P7-201ENST00000452914 242 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 RNU6-420P-201ENST00000458780 107 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 RPL7P48-201ENST00000461513 746 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 MTND1P3-201ENST00000484956 952 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 NUTF2P2-201ENST00000551207 384 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 AL589863.1-201ENST00000595383 631 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 STX8P1-201ENST00000603161 355 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 AC113361.1-201ENST00000606683 543 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 DISC2.1-201ENST00000612827 205 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 AP003471.1-202ENST00000319051 1988 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 AC125232.1-201ENST00000452554 1408 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 DET1-202ENST00000444300 2154 ntTSL 5 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 AC024560.2-201ENST00000507981 1497 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 AL049833.3-201ENST00000623920 3738 ntBASIC8.18□□□□□ -1.1
PHOX2BQ99453 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.18□□□□□ -1.1
PHOX2BQ99453 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
PHOX2BQ99453 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms