Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL352979.3-201ENST00000553515 247 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC006530.1-201ENST00000555980 571 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 RN7SL753P-201ENST00000581238 290 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC022432.1-201ENST00000595739 310 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 YWHAQP7-201ENST00000603536 658 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 SNX18P10-201ENST00000625014 519 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 SNORA16A-202ENST00000628458 135 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AC018992.1-201ENST00000523778 2149 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AC018765.1-201ENST00000623357 3446 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AL512662.1-201ENST00000624850 2251 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 RNA5SP279-201ENST00000365513 117 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 RPL17P50-201ENST00000396131 546 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AL139413.1-201ENST00000421309 217 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 RPL5P6-201ENST00000425640 886 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 NPM1P22-201ENST00000427761 952 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 PSMD10P2-201ENST00000432890 672 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AL590103.1-201ENST00000434488 307 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 GAPDHP59-201ENST00000435908 267 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 HMGN1P2-201ENST00000445197 310 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 HMGB1P48-201ENST00000446155 598 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 OR2AF1P-201ENST00000454899 889 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AC069528.1-202ENST00000482888 637 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AC093870.1-201ENST00000506837 213 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 STMN1P2-201ENST00000508435 439 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 DEFB130C-202ENST00000530001 230 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 DEFB108A-201ENST00000530110 222 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AP004609.2-201ENST00000532177 190 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 RN7SL199P-201ENST00000578752 281 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 RN7SL656P-201ENST00000579044 281 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 RN7SL270P-201ENST00000579643 281 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AC005726.4-201ENST00000582858 458 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AC020910.2-201ENST00000603635 610 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AC015982.1-201ENST00000608113 465 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 MIR7854-201ENST00000620068 65 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AP001052.1-201ENST00000626421 99 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 VPS8-228ENST00000628962 207 ntTSL 5 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 TET1P1-201ENST00000426627 2301 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AC010886.1-201ENST00000437380 2869 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 AL359922.3-201ENST00000624779 1670 ntBASIC8.72□□□□□ -1.01
RC3H1Q5TC82 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RC3H1Q5TC82 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RC3H1Q5TC82 HSPD1P11-201ENST00000508643 1702 ntBASIC8.71□□□□□ -1.01
RC3H1Q5TC82 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
RC3H1Q5TC82 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC8.71□□□□□ -1.01
RC3H1Q5TC82 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
RC3H1Q5TC82 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms