Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.79□□□□□ -1.48
BRCA2P51587 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BRCA2P51587 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BRCA2P51587 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
BRCA2P51587 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BRCA2P51587 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.79□□□□□ -1.48
BRCA2P51587 AL136455.1-201ENST00000441083 1240 ntBASIC5.79□□□□□ -1.48
BRCA2P51587 NDUFA5P8-201ENST00000449019 346 ntBASIC5.79□□□□□ -1.48
BRCA2P51587 RN7SL423P-201ENST00000486202 304 ntBASIC5.79□□□□□ -1.48
BRCA2P51587 GAPDHP56-201ENST00000506031 988 ntBASIC5.79□□□□□ -1.48
BRCA2P51587 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.79□□□□□ -1.48
BRCA2P51587 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.79□□□□□ -1.48
BRCA2P51587 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
BRCA2P51587 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
BRCA2P51587 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.79□□□□□ -1.48
BRCA2P51587 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
BRCA2P51587 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
BRCA2P51587 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.79□□□□□ -1.48
BRCA2P51587 KARSP3-201ENST00000571212 1504 ntBASIC5.79□□□□□ -1.48
BRCA2P51587 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
BRCA2P51587 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
BRCA2P51587 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BRCA2P51587 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 RPL23AP1-201ENST00000428990 471 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.78□□□□□ -1.48
BRCA2P51587 AC006967.1-201ENST00000467608 589 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 AC010618.1-201ENST00000469924 477 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
BRCA2P51587 AC022916.3-201ENST00000592961 742 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 AC011497.2-201ENST00000600255 639 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 AC009237.13-201ENST00000603193 276 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 AL356218.2-201ENST00000605264 187 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
BRCA2P51587 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BRCA2P51587 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
BRCA2P51587 AC097063.1-201ENST00000426714 1797 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
BRCA2P51587 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BRCA2P51587 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BRCA2P51587 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
BRCA2P51587 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
BRCA2P51587 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BRCA2P51587 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.78□□□□□ -1.48
BRCA2P51587 RNU1-85P-201ENST00000364127 164 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 AC007562.1-201ENST00000421819 517 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 AC023274.2-201ENST00000445264 521 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 RPL12P39-201ENST00000455456 496 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.78□□□□□ -1.48
BRCA2P51587 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.78□□□□□ -1.48
BRCA2P51587 SCARNA20.4-201ENST00000516969 131 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.78□□□□□ -1.48
BRCA2P51587 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BRCA2P51587 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BRCA2P51587 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BRCA2P51587 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.78□□□□□ -1.48
BRCA2P51587 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BRCA2P51587 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
BRCA2P51587 THAP12P9-201ENST00000503971 2360 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 MRPS21P2-201ENST00000424704 264 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.78□□□□□ -1.48
BRCA2P51587 RPS17P5-201ENST00000498293 408 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 SCARNA16.4-201ENST00000516956 187 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.78□□□□□ -1.48
BRCA2P51587 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.78□□□□□ -1.48
BRCA2P51587 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.78□□□□□ -1.48
BRCA2P51587 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.78□□□□□ -1.48
BRCA2P51587 AC073869.8-201ENST00000641806 335 ntBASIC5.78□□□□□ -1.48
BRCA2P51587 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
BRCA2P51587 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.78□□□□□ -1.48
BRCA2P51587 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
BRCA2P51587 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BRCA2P51587 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BRCA2P51587 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BRCA2P51587 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC5.78□□□□□ -1.48
BRCA2P51587 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC5.78□□□□□ -1.48
BRCA2P51587 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BRCA2P51587 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRCA2P51587 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.77□□□□□ -1.49
BRCA2P51587 ZNF652P1-201ENST00000442420 1309 ntBASIC5.77□□□□□ -1.49
BRCA2P51587 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.77□□□□□ -1.49
BRCA2P51587 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.77□□□□□ -1.49
BRCA2P51587 CASKP1-201ENST00000412870 582 ntBASIC5.77□□□□□ -1.49
BRCA2P51587 FTH1P25-201ENST00000447665 469 ntBASIC5.77□□□□□ -1.49
BRCA2P51587 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.77□□□□□ -1.49
BRCA2P51587 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.77□□□□□ -1.49
BRCA2P51587 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.77□□□□□ -1.49
BRCA2P51587 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.77□□□□□ -1.49
BRCA2P51587 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRCA2P51587 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BRCA2P51587 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRCA2P51587 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRCA2P51587 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRCA2P51587 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.77□□□□□ -1.49
BRCA2P51587 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRCA2P51587 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC5.77□□□□□ -1.49
BRCA2P51587 RNU1-64P-201ENST00000365443 163 ntBASIC5.77□□□□□ -1.49
BRCA2P51587 MIR105-1-201ENST00000385222 81 ntBASIC5.77□□□□□ -1.49
BRCA2P51587 AC073143.1-201ENST00000436316 395 ntBASIC5.77□□□□□ -1.49
BRCA2P51587 OR52J1P-201ENST00000450596 932 ntBASIC5.77□□□□□ -1.49
BRCA2P51587 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms