Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.92□□□□□ -1.14
RFX1P22670 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.92□□□□□ -1.14
RFX1P22670 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 AP003119.3-201ENST00000566747 4192 ntBASIC7.92□□□□□ -1.14
RFX1P22670 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.91□□□□□ -1.14
RFX1P22670 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.91□□□□□ -1.14
RFX1P22670 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.91□□□□□ -1.14
RFX1P22670 DDX50P1-201ENST00000438163 2400 ntBASIC7.91□□□□□ -1.14
RFX1P22670 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.91□□□□□ -1.14
RFX1P22670 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.91□□□□□ -1.14
RFX1P22670 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC7.91□□□□□ -1.14
RFX1P22670 ATP5F1P4-201ENST00000397288 746 ntBASIC7.91□□□□□ -1.14
RFX1P22670 RPLP1P10-201ENST00000413972 339 ntBASIC7.91□□□□□ -1.14
RFX1P22670 AL161449.1-201ENST00000414531 1199 ntBASIC7.91□□□□□ -1.14
RFX1P22670 AC009413.1-201ENST00000414823 399 ntBASIC7.91□□□□□ -1.14
RFX1P22670 MICG-208ENST00000416822 132 ntBASIC7.91□□□□□ -1.14
RFX1P22670 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.91□□□□□ -1.14
RFX1P22670 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.91□□□□□ -1.14
RFX1P22670 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC7.91□□□□□ -1.14
RFX1P22670 AC104698.1-201ENST00000435671 276 ntBASIC7.91□□□□□ -1.14
RFX1P22670 AL731892.1-201ENST00000437364 1192 ntBASIC7.91□□□□□ -1.14
RFX1P22670 OSTCP2-201ENST00000437956 444 ntBASIC7.91□□□□□ -1.14
RFX1P22670 AC093155.1-201ENST00000440164 826 ntBASIC7.91□□□□□ -1.14
RFX1P22670 TRIM60P18-201ENST00000441518 828 ntBASIC7.91□□□□□ -1.14
RFX1P22670 ST13P20-201ENST00000447996 1065 ntBASIC7.91□□□□□ -1.14
RFX1P22670 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 AC093799.1-201ENST00000452411 499 ntBASIC7.91□□□□□ -1.14
RFX1P22670 OR7E62P-201ENST00000456741 477 ntBASIC7.91□□□□□ -1.14
RFX1P22670 RPLP0P1-201ENST00000457002 361 ntBASIC7.91□□□□□ -1.14
RFX1P22670 VN1R6P-201ENST00000458417 907 ntBASIC7.91□□□□□ -1.14
RFX1P22670 AC104763.1-201ENST00000475274 360 ntBASIC7.91□□□□□ -1.14
RFX1P22670 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.91□□□□□ -1.14
RFX1P22670 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.91□□□□□ -1.14
RFX1P22670 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.91□□□□□ -1.14
RFX1P22670 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.91□□□□□ -1.14
RFX1P22670 AC008868.1-201ENST00000509786 737 ntBASIC7.91□□□□□ -1.14
RFX1P22670 RPL3P13-201ENST00000550415 216 ntBASIC7.91□□□□□ -1.14
RFX1P22670 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC7.91□□□□□ -1.14
RFX1P22670 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC7.91□□□□□ -1.14
RFX1P22670 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.91□□□□□ -1.14
RFX1P22670 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC7.91□□□□□ -1.14
RFX1P22670 EIF4A3P1-201ENST00000578499 647 ntBASIC7.91□□□□□ -1.14
RFX1P22670 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.91□□□□□ -1.14
RFX1P22670 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC7.91□□□□□ -1.14
RFX1P22670 AL390058.1-201ENST00000603834 629 ntBASIC7.91□□□□□ -1.14
RFX1P22670 AP003973.1-201ENST00000604639 691 ntBASIC7.91□□□□□ -1.14
RFX1P22670 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.91□□□□□ -1.14
RFX1P22670 Z99129.1-201ENST00000612510 255 ntBASIC7.91□□□□□ -1.14
RFX1P22670 AC012676.3-201ENST00000614983 479 ntBASIC7.91□□□□□ -1.14
RFX1P22670 AC243830.2-201ENST00000618067 630 ntBASIC7.91□□□□□ -1.14
RFX1P22670 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
RFX1P22670 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.91□□□□□ -1.14
RFX1P22670 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.91□□□□□ -1.14
RFX1P22670 ANKRD36BP1-202ENST00000604892 1417 ntBASIC7.91□□□□□ -1.14
RFX1P22670 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.91□□□□□ -1.14
RFX1P22670 LYARP1-201ENST00000436977 1501 ntBASIC7.91□□□□□ -1.14
RFX1P22670 SOCS5P5-201ENST00000402732 1586 ntBASIC7.91□□□□□ -1.14
RFX1P22670 AC012020.1-201ENST00000624541 1728 ntBASIC7.91□□□□□ -1.14
RFX1P22670 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.91□□□□□ -1.14
RFX1P22670 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.91□□□□□ -1.14
RFX1P22670 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.91□□□□□ -1.14
RFX1P22670 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
RFX1P22670 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.91□□□□□ -1.14
RFX1P22670 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
RFX1P22670 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7.91□□□□□ -1.14
RFX1P22670 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.91□□□□□ -1.14
RFX1P22670 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RFX1P22670 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RFX1P22670 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.9□□□□□ -1.14
RFX1P22670 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RFX1P22670 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RFX1P22670 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
RFX1P22670 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.9□□□□□ -1.14
RFX1P22670 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.9□□□□□ -1.14
RFX1P22670 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
RFX1P22670 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
RFX1P22670 ATP8A2P3-201ENST00000426792 1536 ntBASIC7.9□□□□□ -1.14
RFX1P22670 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.9□□□□□ -1.14
RFX1P22670 AC095050.2-201ENST00000510748 1458 ntBASIC7.9□□□□□ -1.14
RFX1P22670 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.14
RFX1P22670 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RFX1P22670 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
RFX1P22670 AL512353.3-201ENST00000417517 1326 ntBASIC7.9□□□□□ -1.14
RFX1P22670 RNU6-619P-201ENST00000365146 108 ntBASIC7.9□□□□□ -1.14
RFX1P22670 RNA5SP238-201ENST00000365464 120 ntBASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms