Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.74□□□□□ -1.65
CD74P04233 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CD74P04233 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CD74P04233 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 RN7SKP74-201ENST00000362849 309 ntBASIC4.74□□□□□ -1.65
CD74P04233 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 PPIAP9-201ENST00000403866 498 ntBASIC4.74□□□□□ -1.65
CD74P04233 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.74□□□□□ -1.65
CD74P04233 CTSL3P-202ENST00000412179 788 ntBASIC4.74□□□□□ -1.65
CD74P04233 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.74□□□□□ -1.65
CD74P04233 NIFKP3-201ENST00000417799 865 ntBASIC4.74□□□□□ -1.65
CD74P04233 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.74□□□□□ -1.65
CD74P04233 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.74□□□□□ -1.65
CD74P04233 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.74□□□□□ -1.65
CD74P04233 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.74□□□□□ -1.65
CD74P04233 IGBP1P3-201ENST00000447449 1000 ntBASIC4.74□□□□□ -1.65
CD74P04233 AL596266.1-201ENST00000448132 400 ntBASIC4.74□□□□□ -1.65
CD74P04233 PRPF38AP1-201ENST00000451976 933 ntBASIC4.74□□□□□ -1.65
CD74P04233 AC021660.1-201ENST00000465006 554 ntBASIC4.74□□□□□ -1.65
CD74P04233 AC099521.1-201ENST00000482557 334 ntBASIC4.74□□□□□ -1.65
CD74P04233 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.74□□□□□ -1.65
CD74P04233 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.74□□□□□ -1.65
CD74P04233 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.74□□□□□ -1.65
CD74P04233 IGLV3-24-201ENST00000517477 197 ntBASIC4.74□□□□□ -1.65
CD74P04233 AC092709.1-201ENST00000521355 1045 ntBASIC4.74□□□□□ -1.65
CD74P04233 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.74□□□□□ -1.65
CD74P04233 AC130364.2-201ENST00000528639 604 ntBASIC4.74□□□□□ -1.65
CD74P04233 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.74□□□□□ -1.65
CD74P04233 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.74□□□□□ -1.65
CD74P04233 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.74□□□□□ -1.65
CD74P04233 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.74□□□□□ -1.65
CD74P04233 AC096996.1-201ENST00000563813 325 ntBASIC4.74□□□□□ -1.65
CD74P04233 AC127024.5-201ENST00000580085 462 ntBASIC4.74□□□□□ -1.65
CD74P04233 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.74□□□□□ -1.65
CD74P04233 WBP1LP11-201ENST00000586141 328 ntBASIC4.74□□□□□ -1.65
CD74P04233 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.74□□□□□ -1.65
CD74P04233 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.74□□□□□ -1.65
CD74P04233 AL390877.1-201ENST00000605704 214 ntBASIC4.74□□□□□ -1.65
CD74P04233 AL365181.4-201ENST00000609800 547 ntBASIC4.74□□□□□ -1.65
CD74P04233 MIR6780B-201ENST00000610307 79 ntBASIC4.74□□□□□ -1.65
CD74P04233 uc_338.7-201ENST00000621834 124 ntBASIC4.74□□□□□ -1.65
CD74P04233 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.74□□□□□ -1.65
CD74P04233 SAMMSON-227ENST00000642114 1199 ntBASIC4.74□□□□□ -1.65
CD74P04233 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
CD74P04233 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.74□□□□□ -1.65
CD74P04233 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CD74P04233 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.74□□□□□ -1.65
CD74P04233 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.74□□□□□ -1.65
CD74P04233 GVINP1-202ENST00000531871 7271 ntBASIC4.74□□□□□ -1.65
CD74P04233 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 Z83820.1-201ENST00000456978 1499 ntBASIC4.74□□□□□ -1.65
CD74P04233 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
CD74P04233 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.74□□□□□ -1.65
CD74P04233 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
CD74P04233 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CD74P04233 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CD74P04233 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD74P04233 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD74P04233 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.73□□□□□ -1.65
CD74P04233 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.73□□□□□ -1.65
CD74P04233 LINC01613-201ENST00000561476 2780 ntBASIC4.73□□□□□ -1.65
CD74P04233 LYARP1-201ENST00000436977 1501 ntBASIC4.73□□□□□ -1.65
CD74P04233 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CD74P04233 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CD74P04233 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD74P04233 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD74P04233 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD74P04233 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD74P04233 AL133260.1-201ENST00000405720 405 ntBASIC4.73□□□□□ -1.65
CD74P04233 RNA5SP198-201ENST00000410376 127 ntBASIC4.73□□□□□ -1.65
CD74P04233 AC113412.1-201ENST00000425840 504 ntBASIC4.73□□□□□ -1.65
CD74P04233 RPL7P56-201ENST00000429441 717 ntBASIC4.73□□□□□ -1.65
CD74P04233 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.73□□□□□ -1.65
CD74P04233 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.73□□□□□ -1.65
CD74P04233 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.73□□□□□ -1.65
CD74P04233 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CD74P04233 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.73□□□□□ -1.65
CD74P04233 AC234771.2-201ENST00000445718 597 ntBASIC4.73□□□□□ -1.65
CD74P04233 AC012512.1-201ENST00000446594 718 ntBASIC4.73□□□□□ -1.65
CD74P04233 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.73□□□□□ -1.65
CD74P04233 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.73□□□□□ -1.65
CD74P04233 GEMIN2P1-201ENST00000454246 752 ntBASIC4.73□□□□□ -1.65
CD74P04233 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.73□□□□□ -1.65
CD74P04233 RN7SL568P-201ENST00000493069 298 ntBASIC4.73□□□□□ -1.65
CD74P04233 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC4.73□□□□□ -1.65
CD74P04233 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.73□□□□□ -1.65
CD74P04233 ZNF519P4-201ENST00000514008 125 ntBASIC4.73□□□□□ -1.65
CD74P04233 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms