Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
AP3S2P59780 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S2P59780 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
AP3S2P59780 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S2P59780 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.81□□□□□ -1.64
AP3S2P59780 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S2P59780 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S2P59780 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S2P59780 RBPJP7-201ENST00000442803 1447 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 RBPJP5-201ENST00000449433 1447 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP3S2P59780 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP3S2P59780 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.8□□□□□ -1.64
AP3S2P59780 AC104260.2-201ENST00000623551 3497 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP3S2P59780 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP3S2P59780 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP3S2P59780 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP3S2P59780 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP3S2P59780 RNA5SP429-201ENST00000363688 109 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC4.8□□□□□ -1.64
AP3S2P59780 BMS1P3-201ENST00000372011 932 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP3S2P59780 AC226101.1-201ENST00000401483 387 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 AC211486.3-201ENST00000412694 621 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.8□□□□□ -1.64
AP3S2P59780 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.8□□□□□ -1.64
AP3S2P59780 GRPEL2P2-201ENST00000421856 670 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.8□□□□□ -1.64
AP3S2P59780 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.8□□□□□ -1.64
AP3S2P59780 SNRPFP2-201ENST00000440710 251 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 AC239800.1-201ENST00000442049 719 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 GTF3AP5-201ENST00000442645 697 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 RPS7P4-201ENST00000444127 582 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 UBFD1P1-201ENST00000473259 814 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.8□□□□□ -1.64
AP3S2P59780 AC010409.2-201ENST00000505780 478 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.8□□□□□ -1.64
AP3S2P59780 SNX18P25-201ENST00000510539 758 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC4.8□□□□□ -1.64
AP3S2P59780 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.8□□□□□ -1.64
AP3S2P59780 EIF3KP3-201ENST00000514461 639 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 RN7SKP253-201ENST00000516424 309 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 RN7SKP64-201ENST00000517206 328 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.8□□□□□ -1.64
AP3S2P59780 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC4.8□□□□□ -1.64
AP3S2P59780 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.8□□□□□ -1.64
AP3S2P59780 OR9G2P-201ENST00000533326 880 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.8□□□□□ -1.64
AP3S2P59780 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.8□□□□□ -1.64
AP3S2P59780 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.8□□□□□ -1.64
AP3S2P59780 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.8□□□□□ -1.64
AP3S2P59780 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.8□□□□□ -1.64
AP3S2P59780 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.8□□□□□ -1.64
AP3S2P59780 AL031429.2-201ENST00000602605 649 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 AC006453.3-201ENST00000635891 377 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP3S2P59780 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP3S2P59780 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
AP3S2P59780 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP3S2P59780 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP3S2P59780 THAP12P5-201ENST00000405864 2275 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 AC025574.1-201ENST00000554784 1653 ntBASIC4.8□□□□□ -1.64
AP3S2P59780 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP3S2P59780 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
AP3S2P59780 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.79□□□□□ -1.64
AP3S2P59780 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AP3S2P59780 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S2P59780 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S2P59780 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S2P59780 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S2P59780 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S2P59780 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AP3S2P59780 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.79□□□□□ -1.64
AP3S2P59780 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AP3S2P59780 OR56A4-201ENST00000330728 1209 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S2P59780 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AP3S2P59780 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S2P59780 PPIAP9-201ENST00000403866 498 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 AL139805.1-201ENST00000407837 289 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 RN7SKP247-201ENST00000411094 308 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S2P59780 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S2P59780 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S2P59780 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S2P59780 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S2P59780 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
AP3S2P59780 CENPN-204ENST00000428963 971 ntTSL 2 BASIC4.79□□□□□ -1.64
AP3S2P59780 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S2P59780 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S2P59780 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.79□□□□□ -1.64
AP3S2P59780 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S2P59780 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 PHBP4-201ENST00000437447 837 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S2P59780 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S2P59780 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AP3S2P59780 AC019084.1-201ENST00000457337 432 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 RN7SL39P-201ENST00000462264 297 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms