Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDGFAP04085 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDGFAP04085 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDGFAP04085 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.07□□□□□ -1.28
PDGFAP04085 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDGFAP04085 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.07□□□□□ -1.28
PDGFAP04085 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDGFAP04085 MFSD8-217ENST00000641178 4374 ntBASIC7.07□□□□□ -1.28
PDGFAP04085 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.07□□□□□ -1.28
PDGFAP04085 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDGFAP04085 MTND4P29-201ENST00000503122 1372 ntBASIC7.07□□□□□ -1.28
PDGFAP04085 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDGFAP04085 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDGFAP04085 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDGFAP04085 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.06□□□□□ -1.28
PDGFAP04085 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC7.06□□□□□ -1.28
PDGFAP04085 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.06□□□□□ -1.28
PDGFAP04085 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.06□□□□□ -1.28
PDGFAP04085 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.06□□□□□ -1.28
PDGFAP04085 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.06□□□□□ -1.28
PDGFAP04085 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.06□□□□□ -1.28
PDGFAP04085 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
PDGFAP04085 RNA5SP396-201ENST00000364834 120 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 RNU6-619P-201ENST00000365146 108 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
PDGFAP04085 SNORD115-47-201ENST00000391226 86 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 AC007066.1-201ENST00000392902 381 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 H2AFZP3-201ENST00000394213 387 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 RPL23AP47-201ENST00000408017 460 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.06□□□□□ -1.28
PDGFAP04085 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.06□□□□□ -1.28
PDGFAP04085 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC7.06□□□□□ -1.28
PDGFAP04085 SKP1P3-201ENST00000429280 487 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.06□□□□□ -1.28
PDGFAP04085 RPL14P5-201ENST00000436474 730 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.06□□□□□ -1.28
PDGFAP04085 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.06□□□□□ -1.28
PDGFAP04085 AC239367.2-201ENST00000447309 705 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 OR51P1P-201ENST00000447547 942 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.06□□□□□ -1.28
PDGFAP04085 AC092570.2-201ENST00000452117 1143 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 AC098824.1-201ENST00000453565 980 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 AC239798.3-201ENST00000454459 408 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
PDGFAP04085 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC7.06□□□□□ -1.28
PDGFAP04085 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC7.06□□□□□ -1.28
PDGFAP04085 RN7SL870P-201ENST00000460111 296 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 AL121769.1-201ENST00000469473 401 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 AL928654.1-201ENST00000476081 354 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 RPL9P6-201ENST00000492764 598 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 AC114781.4-201ENST00000513707 639 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 Y_RNA.702-201ENST00000516843 96 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.06□□□□□ -1.28
PDGFAP04085 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC7.06□□□□□ -1.28
PDGFAP04085 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.06□□□□□ -1.28
PDGFAP04085 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.06□□□□□ -1.28
PDGFAP04085 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.06□□□□□ -1.28
PDGFAP04085 AC068631.3-201ENST00000538831 225 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 DUX4L52-201ENST00000549363 777 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 CR383656.6-201ENST00000550518 394 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.06□□□□□ -1.28
PDGFAP04085 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.06□□□□□ -1.28
PDGFAP04085 DPPA2P4-201ENST00000563717 878 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.06□□□□□ -1.28
PDGFAP04085 SIGLEC31P-201ENST00000594237 551 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 AL137072.1-201ENST00000603444 466 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.06□□□□□ -1.28
PDGFAP04085 AC006335.3-201ENST00000613408 292 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 AL157786.1-207ENST00000627771 695 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 KYNUP1-201ENST00000466683 1406 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 AC114786.1-201ENST00000512892 1415 ntBASIC7.06□□□□□ -1.28
PDGFAP04085 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC7.06□□□□□ -1.28
PDGFAP04085 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
PDGFAP04085 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.06□□□□□ -1.28
PDGFAP04085 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDGFAP04085 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
PDGFAP04085 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
PDGFAP04085 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDGFAP04085 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.05□□□□□ -1.28
PDGFAP04085 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms