Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC188H7C350 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC188H7C350 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC188H7C350 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CCDC188H7C350 AC104964.3-201ENST00000606115 2860 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC188H7C350 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CCDC188H7C350 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC188H7C350 RNU6-386P-201ENST00000362650 107 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC188H7C350 AL035422.1-201ENST00000414193 397 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC188H7C350 NIFKP3-201ENST00000417799 865 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC188H7C350 GAPDHP48-201ENST00000436626 961 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 TUBB4BP6-201ENST00000437576 479 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 AL353662.1-201ENST00000439099 327 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC188H7C350 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC188H7C350 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC188H7C350 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC188H7C350 TAAR4P-201ENST00000454843 1039 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 HMGN1P17-201ENST00000513734 295 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 NPM1P52-201ENST00000518264 846 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC188H7C350 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC188H7C350 HMGN1P26-201ENST00000558737 303 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC188H7C350 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
CCDC188H7C350 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC188H7C350 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC188H7C350 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC188H7C350 AP005119.1-201ENST00000580956 292 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 AC005244.1-201ENST00000582566 339 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC188H7C350 OR7M1P-201ENST00000608946 533 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 AL135999.3-201ENST00000610501 812 ntBASIC5.9□□□□□ -1.46
CCDC188H7C350 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC188H7C350 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
CCDC188H7C350 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC188H7C350 AL359715.3-201ENST00000569267 2123 ntBASIC5.9□□□□□ -1.47
CCDC188H7C350 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.9□□□□□ -1.47
CCDC188H7C350 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC188H7C350 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC188H7C350 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.9□□□□□ -1.47
CCDC188H7C350 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC188H7C350 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC188H7C350 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC188H7C350 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CCDC188H7C350 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC188H7C350 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CCDC188H7C350 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CCDC188H7C350 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
CCDC188H7C350 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCDC188H7C350 AL096711.1-201ENST00000404780 554 ntBASIC5.89□□□□□ -1.47
CCDC188H7C350 HYALP1-201ENST00000417674 1279 ntBASIC5.89□□□□□ -1.47
CCDC188H7C350 AKR1B10P1-201ENST00000425765 942 ntBASIC5.89□□□□□ -1.47
CCDC188H7C350 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.89□□□□□ -1.47
CCDC188H7C350 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC188H7C350 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC188H7C350 AC005017.1-201ENST00000482002 490 ntBASIC5.89□□□□□ -1.47
CCDC188H7C350 RN7SL570P-201ENST00000484405 292 ntBASIC5.89□□□□□ -1.47
CCDC188H7C350 AGGF1P3-201ENST00000493675 1213 ntBASIC5.89□□□□□ -1.47
CCDC188H7C350 AC021193.1-201ENST00000511607 420 ntBASIC5.89□□□□□ -1.47
CCDC188H7C350 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC188H7C350 PRMT5P1-201ENST00000514351 598 ntBASIC5.89□□□□□ -1.47
CCDC188H7C350 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC188H7C350 AC139365.2-201ENST00000517972 253 ntBASIC5.89□□□□□ -1.47
CCDC188H7C350 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC188H7C350 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC188H7C350 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC188H7C350 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC188H7C350 AL136228.1-201ENST00000622221 319 ntBASIC5.89□□□□□ -1.47
CCDC188H7C350 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC188H7C350 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.89□□□□□ -1.47
CCDC188H7C350 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC188H7C350 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC188H7C350 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC188H7C350 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CCDC188H7C350 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CCDC188H7C350 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC188H7C350 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC188H7C350 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC188H7C350 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CCDC188H7C350 QRSL1P1-201ENST00000400977 1540 ntBASIC5.89□□□□□ -1.47
CCDC188H7C350 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC188H7C350 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CCDC188H7C350 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC188H7C350 GVINP1-202ENST00000531871 7271 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC188H7C350 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC188H7C350 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC188H7C350 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC188H7C350 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC188H7C350 AL022311.1-201ENST00000623726 19416 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC188H7C350 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CCDC188H7C350 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC188H7C350 RNU6-891P-201ENST00000384280 111 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 RAB5CP1-201ENST00000395972 580 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms