Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC026470.2-201ENST00000561492 181 ntBASIC10.08□□□□□ -0.8
PHF8Q9UPP1 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC10.08□□□□□ -0.8
PHF8Q9UPP1 RPSAP66-201ENST00000592196 606 ntBASIC10.08□□□□□ -0.8
PHF8Q9UPP1 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC10.08□□□□□ -0.8
PHF8Q9UPP1 AL355802.3-201ENST00000607571 545 ntBASIC10.08□□□□□ -0.8
PHF8Q9UPP1 RPSAP68-201ENST00000625020 438 ntBASIC10.08□□□□□ -0.8
PHF8Q9UPP1 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC10.08□□□□□ -0.8
PHF8Q9UPP1 MT-RNR2-201ENST00000387347 1559 ntBASIC10.08□□□□□ -0.8
PHF8Q9UPP1 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC10.08□□□□□ -0.8
PHF8Q9UPP1 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PHF8Q9UPP1 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PHF8Q9UPP1 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 IARS-205ENST00000443024 4341 ntTSL 5 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AC006116.1-201ENST00000587908 2171 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AL136146.1-201ENST00000529830 1667 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 RPL11P4-201ENST00000332269 436 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 RNU6-878P-201ENST00000384578 110 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 RNA5SP53-201ENST00000391299 120 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 MIR1272-201ENST00000408106 129 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 FCF1P2-201ENST00000415284 583 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AL022238.1-201ENST00000442557 355 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 HMGB1P5-202ENST00000451497 985 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AC022364.2-201ENST00000457963 554 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 RPS20P4-201ENST00000461659 355 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AP000797.1-201ENST00000478870 387 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 RN7SL502P-201ENST00000481857 290 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 RPS7P6-201ENST00000485777 579 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AC026427.2-201ENST00000506228 536 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 ARL2BPP5-201ENST00000523141 481 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AC069240.2-201ENST00000550242 609 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AL359212.1-201ENST00000556608 614 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 MIR3913-1-201ENST00000577744 102 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AC024267.2-201ENST00000582737 417 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AL139286.1-201ENST00000604465 483 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AC007363.1-201ENST00000604736 620 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AC019257.2-201ENST00000605539 497 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 AL132765.2-201ENST00000610812 351 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 OR4G11P-202ENST00000642116 1414 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 PARP9-205ENST00000477522 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 ATP5A1P1-201ENST00000454088 1321 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 DCAF13P1-201ENST00000495256 1330 ntBASIC10.07□□□□□ -0.8
PHF8Q9UPP1 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
PHF8Q9UPP1 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 AC079777.1-201ENST00000623836 1953 ntBASIC10.06□□□□□ -0.8
PHF8Q9UPP1 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 HSPA8P17-201ENST00000427029 1382 ntBASIC10.06□□□□□ -0.8
PHF8Q9UPP1 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 Y_RNA.72-201ENST00000362894 103 ntBASIC10.06□□□□□ -0.8
PHF8Q9UPP1 Y_RNA.419-201ENST00000384041 102 ntBASIC10.06□□□□□ -0.8
PHF8Q9UPP1 RNU6-31P-201ENST00000384388 108 ntBASIC10.06□□□□□ -0.8
PHF8Q9UPP1 MIR621-201ENST00000384919 96 ntBASIC10.06□□□□□ -0.8
PHF8Q9UPP1 AL136100.1-201ENST00000407696 330 ntBASIC10.06□□□□□ -0.8
PHF8Q9UPP1 RNA5SP280-201ENST00000411230 115 ntBASIC10.06□□□□□ -0.8
PHF8Q9UPP1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 AC097527.1-201ENST00000437031 530 ntBASIC10.06□□□□□ -0.8
PHF8Q9UPP1 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 ACTR3P2-201ENST00000439585 1257 ntBASIC10.06□□□□□ -0.8
PHF8Q9UPP1 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC10.06□□□□□ -0.8
PHF8Q9UPP1 SNRPGP6-201ENST00000451124 220 ntBASIC10.06□□□□□ -0.8
PHF8Q9UPP1 AL035407.2-201ENST00000454090 378 ntBASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms