Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MTND4LP18-201ENST00000526864 291 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC016144.1-201ENST00000548175 1087 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 GARSP1-201ENST00000570895 719 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 OR51C1P-201ENST00000608504 942 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC013468.1-201ENST00000608680 598 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 MIR6768-201ENST00000610734 72 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 Z69908.1-201ENST00000622603 247 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AL122023.1-201ENST00000622847 530 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC007490.1-201ENST00000624321 703 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC019226.1-201ENST00000625666 515 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC096992.2-201ENST00000609553 1684 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 ECM1P2-201ENST00000503354 1577 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 Z97989.1-201ENST00000531702 2421 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 RNU4-4P-201ENST00000364588 130 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 RNA5SP77-201ENST00000365394 120 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AC091390.2-201ENST00000432573 374 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 RN7SL552P-201ENST00000462094 276 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AC090114.3-201ENST00000479267 829 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AC080014.1-201ENST00000496877 1201 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 RPL5P11-201ENST00000498068 893 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 RN7SKP34-201ENST00000516142 244 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 RNU6-1028P-201ENST00000517164 93 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 RPL3P13-201ENST00000550415 216 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AL845552.1-201ENST00000556820 323 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AC023813.2-201ENST00000564321 469 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 RN7SL199P-201ENST00000578752 281 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 RN7SL656P-201ENST00000579044 281 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 SMIM12P1-201ENST00000603004 274 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AL163642.2-201ENST00000604722 1019 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AL021997.1-201ENST00000605757 193 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AC099842.1-201ENST00000619919 596 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AC034229.6-201ENST00000623704 224 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AC114546.4-201ENST00000624413 369 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 MIR1322-201ENST00000638013 71 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms