Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SDCBPO00560 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SDCBPO00560 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SDCBPO00560 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SDCBPO00560 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SDCBPO00560 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.76□□□□□ -1.65
SDCBPO00560 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SDCBPO00560 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.76□□□□□ -1.65
SDCBPO00560 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.76□□□□□ -1.65
SDCBPO00560 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SDCBPO00560 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SDCBPO00560 OR4F13P-202ENST00000560066 2054 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SDCBPO00560 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SDCBPO00560 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SDCBPO00560 AC083843.2-201ENST00000568248 6253 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SDCBPO00560 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SDCBPO00560 RNA5SP187-201ENST00000384400 119 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 MIR130A-201ENST00000385274 89 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SDCBPO00560 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SDCBPO00560 RN7SKP29-201ENST00000410957 272 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 AL354890.1-201ENST00000413730 346 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 AC069154.1-201ENST00000432914 542 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.76□□□□□ -1.65
SDCBPO00560 GAPDHP48-201ENST00000436626 961 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.76□□□□□ -1.65
SDCBPO00560 AC068491.1-201ENST00000449539 1241 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SDCBPO00560 ACA64.1-201ENST00000459171 127 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 RN7SL193P-201ENST00000491708 276 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 LSM3P4-201ENST00000502948 309 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.76□□□□□ -1.65
SDCBPO00560 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.76□□□□□ -1.65
SDCBPO00560 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.76□□□□□ -1.65
SDCBPO00560 AP004609.2-201ENST00000532177 190 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.76□□□□□ -1.65
SDCBPO00560 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SDCBPO00560 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.76□□□□□ -1.65
SDCBPO00560 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.76□□□□□ -1.65
SDCBPO00560 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.76□□□□□ -1.65
SDCBPO00560 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC4.76□□□□□ -1.65
SDCBPO00560 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.76□□□□□ -1.65
SDCBPO00560 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.76□□□□□ -1.65
SDCBPO00560 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.76□□□□□ -1.65
SDCBPO00560 AC018809.2-201ENST00000602436 3823 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 AL049840.6-201ENST00000604583 345 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.76□□□□□ -1.65
SDCBPO00560 AC010632.3-201ENST00000611377 369 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 MIR7109-201ENST00000613748 65 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.76□□□□□ -1.65
SDCBPO00560 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.76□□□□□ -1.65
SDCBPO00560 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.76□□□□□ -1.65
SDCBPO00560 AC144833.1-201ENST00000567953 4089 ntBASIC4.76□□□□□ -1.65
SDCBPO00560 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SDCBPO00560 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SDCBPO00560 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SDCBPO00560 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.76□□□□□ -1.65
SDCBPO00560 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.75□□□□□ -1.65
SDCBPO00560 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SDCBPO00560 SSXP3-201ENST00000442971 1300 ntBASIC4.75□□□□□ -1.65
SDCBPO00560 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.75□□□□□ -1.65
SDCBPO00560 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SDCBPO00560 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
SDCBPO00560 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SDCBPO00560 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SDCBPO00560 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SDCBPO00560 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.75□□□□□ -1.65
SDCBPO00560 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.75□□□□□ -1.65
SDCBPO00560 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.75□□□□□ -1.65
SDCBPO00560 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.75□□□□□ -1.65
SDCBPO00560 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.75□□□□□ -1.65
SDCBPO00560 NDUFB4P8-201ENST00000435351 367 ntBASIC4.75□□□□□ -1.65
SDCBPO00560 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.75□□□□□ -1.65
SDCBPO00560 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.75□□□□□ -1.65
SDCBPO00560 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.75□□□□□ -1.65
SDCBPO00560 AC019084.1-201ENST00000457337 432 ntBASIC4.75□□□□□ -1.65
SDCBPO00560 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.75□□□□□ -1.65
SDCBPO00560 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.75□□□□□ -1.65
SDCBPO00560 AC027369.2-201ENST00000528030 440 ntBASIC4.75□□□□□ -1.65
SDCBPO00560 AC006530.1-201ENST00000555980 571 ntBASIC4.75□□□□□ -1.65
SDCBPO00560 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.75□□□□□ -1.65
SDCBPO00560 AGGF1P7-201ENST00000562369 913 ntBASIC4.75□□□□□ -1.65
SDCBPO00560 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.75□□□□□ -1.65
SDCBPO00560 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
SDCBPO00560 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SDCBPO00560 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SDCBPO00560 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SDCBPO00560 AL139124.1-201ENST00000609123 421 ntBASIC4.75□□□□□ -1.65
SDCBPO00560 MIR6780B-201ENST00000610307 79 ntBASIC4.75□□□□□ -1.65
SDCBPO00560 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SDCBPO00560 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.75□□□□□ -1.65
SDCBPO00560 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SDCBPO00560 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.75□□□□□ -1.65
SDCBPO00560 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.75□□□□□ -1.65
SDCBPO00560 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.75□□□□□ -1.65
SDCBPO00560 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.75□□□□□ -1.65
SDCBPO00560 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.75□□□□□ -1.65
SDCBPO00560 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms