Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC28A1O00337 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.53□□□□□ -1.52
SLC28A1O00337 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC28A1O00337 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC28A1O00337 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC28A1O00337 MIR4502-201ENST00000580432 81 ntBASIC5.53□□□□□ -1.52
SLC28A1O00337 AC060766.1-201ENST00000590824 627 ntBASIC5.53□□□□□ -1.52
SLC28A1O00337 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC28A1O00337 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC28A1O00337 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC28A1O00337 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SLC28A1O00337 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC28A1O00337 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC28A1O00337 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC28A1O00337 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SLC28A1O00337 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC28A1O00337 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC28A1O00337 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC28A1O00337 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC28A1O00337 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC28A1O00337 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC28A1O00337 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
SLC28A1O00337 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
SLC28A1O00337 AP005435.3-201ENST00000531260 3198 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC28A1O00337 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC28A1O00337 CASC19-238ENST00000641523 1558 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 OR7E25P-201ENST00000344844 931 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 MIR133A2-201ENST00000347538 102 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 RN7SKP29-201ENST00000410957 272 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC28A1O00337 AC096644.3-201ENST00000416788 338 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC28A1O00337 TMEM183AP1-205ENST00000432739 290 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SLC28A1O00337 PNKDP1-201ENST00000435914 430 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 AC023194.2-201ENST00000465398 406 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 AL122020.1-201ENST00000472287 459 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 DUTP1-201ENST00000493631 470 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 RN7SL57P-201ENST00000493687 290 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC28A1O00337 SCARNA18.1-201ENST00000516330 83 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 IGKV3D-25-201ENST00000519599 235 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC28A1O00337 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.52□□□□□ -1.53
SLC28A1O00337 AC139697.1-201ENST00000548429 745 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC28A1O00337 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC28A1O00337 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC28A1O00337 AP000919.1-201ENST00000582850 985 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC28A1O00337 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC28A1O00337 HTR1DP1-201ENST00000616500 888 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 AC111152.1-202ENST00000635848 339 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC28A1O00337 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC28A1O00337 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SLC28A1O00337 PDZK1P1-202ENST00000425209 1350 ntBASIC5.52□□□□□ -1.53
SLC28A1O00337 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC28A1O00337 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC28A1O00337 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC28A1O00337 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC28A1O00337 AF287957.1-201ENST00000607368 1595 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC28A1O00337 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.51□□□□□ -1.53
SLC28A1O00337 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC28A1O00337 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC28A1O00337 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC28A1O00337 HSPD1P7-201ENST00000447985 1686 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC28A1O00337 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC28A1O00337 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC28A1O00337 RNFT1P3-201ENST00000340898 1052 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 AL121886.1-201ENST00000358609 435 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
SLC28A1O00337 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.51□□□□□ -1.53
SLC28A1O00337 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SLC28A1O00337 PEX12P1-201ENST00000400284 1048 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 AC098592.2-201ENST00000413158 265 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 AC117434.1-201ENST00000419971 836 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC28A1O00337 NPM1P18-201ENST00000434232 732 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 ATP5LP2-201ENST00000440646 311 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC28A1O00337 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SLC28A1O00337 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC28A1O00337 AC090602.1-201ENST00000469695 252 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC28A1O00337 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.51□□□□□ -1.53
SLC28A1O00337 AC018797.1-201ENST00000510791 255 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC28A1O00337 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC28A1O00337 RFPL4AP3-201ENST00000515267 345 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 RN7SKP238-201ENST00000516483 249 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC28A1O00337 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.51□□□□□ -1.53
SLC28A1O00337 AC007956.1-201ENST00000555623 542 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 AC011270.1-201ENST00000558606 583 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms