Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 AC096741.1-201ENST00000472250 846 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 AC023194.1-201ENST00000493084 308 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 AL117692.1-201ENST00000494283 713 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 AC093278.1-201ENST00000494700 600 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 OR51A1P-201ENST00000511110 946 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 AP002360.1-204ENST00000529331 700 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 AC013828.2-201ENST00000532487 235 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 PHBP2-201ENST00000532859 806 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 AL121594.2-201ENST00000541658 472 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 AL049869.4-201ENST00000555669 178 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 AL109628.1-201ENST00000556877 366 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 AC093519.1-201ENST00000566109 298 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 AL355375.2-201ENST00000574825 175 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 AL391646.1-201ENST00000603860 190 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 AL355802.3-201ENST00000607571 545 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 AC016876.3-201ENST00000610459 426 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 MIR6745-201ENST00000612694 127 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 AC005609.2-201ENST00000623320 592 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 METAP1-212ENST00000625963 147 ntTSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 LINC00710-219ENST00000635054 938 ntTSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 AL353763.2-201ENST00000623489 1903 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 AC008522.1-201ENST00000639479 2906 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 DPH3-204ENST00000488423 3131 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 HK1-203ENST00000360289 3961 ntTSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PHOX2BQ99453 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
PHOX2BQ99453 CCT8P1-201ENST00000413611 1657 ntBASIC8.24□□□□□ -1.09
PHOX2BQ99453 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PHOX2BQ99453 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PHOX2BQ99453 C3P1-202ENST00000497718 4954 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 AL354854.1-201ENST00000455940 1363 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PHOX2BQ99453 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
PHOX2BQ99453 LRTOMT-203ENST00000324866 2402 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PHOX2BQ99453 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PHOX2BQ99453 ATP8A2P2-201ENST00000437678 1568 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PHOX2BQ99453 AC011297.1-201ENST00000620503 2110 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 EIF4BP4-201ENST00000441847 1780 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PHOX2BQ99453 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
PHOX2BQ99453 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PHOX2BQ99453 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PHOX2BQ99453 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 Y_RNA.58-201ENST00000362807 102 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 Y_RNA.154-201ENST00000363624 102 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 RNY3P1-201ENST00000365085 102 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 RNY3-201ENST00000365484 102 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 Y_RNA.490-201ENST00000384413 102 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 SNORD116-23-201ENST00000384645 92 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 IL6-206ENST00000407492 926 ntTSL 3 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 RNU2-8P-201ENST00000410727 190 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 AGBL5-IT1-201ENST00000411862 339 ntTSL 3 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 SNRPFP1-201ENST00000414761 252 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 AC019181.1-201ENST00000417151 310 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 EIF4A1P2-201ENST00000422633 1220 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 AL137793.1-201ENST00000433734 599 ntTSL 3 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 RPS10P14-201ENST00000440748 502 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 RPL31P15-201ENST00000449770 338 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 ST13P21-201ENST00000453250 1098 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 MTND1P12-201ENST00000455231 147 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 AC233279.1-201ENST00000455300 423 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 ABCA9-AS1-201ENST00000458677 523 ntTSL 2 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 RPS18P13-201ENST00000461260 454 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 RPL7P19-201ENST00000469948 618 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 RN7SL58P-201ENST00000473445 294 ntBASIC8.23□□□□□ -1.09
PHOX2BQ99453 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC8.23□□□□□ -1.09
PHOX2BQ99453 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms