Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 RNA5SP464-201ENST00000516251 108 ntBASIC2.11□□□□□ -2.07
NEBP20929 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.11□□□□□ -2.07
NEBP20929 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 AL356986.1-201ENST00000604085 341 ntBASIC2.11□□□□□ -2.07
NEBP20929 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 AC006600.2-201ENST00000624834 2506 ntBASIC2.11□□□□□ -2.07
NEBP20929 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC2.11□□□□□ -2.07
NEBP20929 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC2.11□□□□□ -2.07
NEBP20929 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 CREM-217ENST00000439705 2306 ntTSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 TENM2-207ENST00000520394 8034 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 OR4K17-201ENST00000315543 1032 ntBASIC2.11□□□□□ -2.07
NEBP20929 RNA5SP455-201ENST00000365190 119 ntBASIC2.11□□□□□ -2.07
NEBP20929 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
NEBP20929 AC211486.3-201ENST00000412694 621 ntBASIC2.11□□□□□ -2.07
NEBP20929 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 AC026444.1-201ENST00000502592 496 ntBASIC2.11□□□□□ -2.07
NEBP20929 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC2.11□□□□□ -2.07
NEBP20929 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC2.11□□□□□ -2.07
NEBP20929 AC008782.1-201ENST00000603386 430 ntBASIC2.11□□□□□ -2.07
NEBP20929 AC096861.1-201ENST00000616652 240 ntBASIC2.11□□□□□ -2.07
NEBP20929 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 SPATA31B1P-201ENST00000434692 4016 ntBASIC2.11□□□□□ -2.07
NEBP20929 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
NEBP20929 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 SAMMSON-210ENST00000641260 1308 ntBASIC2.11□□□□□ -2.07
NEBP20929 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC2.11□□□□□ -2.07
NEBP20929 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC2.11□□□□□ -2.07
NEBP20929 AL590762.1-201ENST00000391782 432 ntBASIC2.11□□□□□ -2.07
NEBP20929 ERG-202ENST00000398897 4651 ntTSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NEBP20929 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 AC097484.1-201ENST00000471148 389 ntBASIC2.11□□□□□ -2.07
NEBP20929 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC2.11□□□□□ -2.07
NEBP20929 RNA5SP43-201ENST00000516559 110 ntBASIC2.11□□□□□ -2.07
NEBP20929 AC087575.1-201ENST00000585087 229 ntBASIC2.11□□□□□ -2.07
NEBP20929 SSX9-202ENST00000608568 580 ntTSL 4 BASIC2.11□□□□□ -2.07
NEBP20929 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC2.11□□□□□ -2.07
NEBP20929 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 PLCG2-207ENST00000564138 8707 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC2.11□□□□□ -2.07
NEBP20929 LIMCH1-215ENST00000512632 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
NEBP20929 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC2.11□□□□□ -2.07
NEBP20929 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 SPRR2C-201ENST00000290702 219 ntBASIC2.11□□□□□ -2.07
NEBP20929 OR52E6-202ENST00000379946 954 ntBASIC2.11□□□□□ -2.07
NEBP20929 RN7SKP17-201ENST00000411242 351 ntBASIC2.11□□□□□ -2.07
NEBP20929 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC2.11□□□□□ -2.07
NEBP20929 HLA-N-201ENST00000437516 135 ntBASIC2.11□□□□□ -2.07
NEBP20929 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC2.11□□□□□ -2.07
NEBP20929 VN1R105P-201ENST00000486595 910 ntBASIC2.11□□□□□ -2.07
NEBP20929 AC134349.2-201ENST00000535136 910 ntBASIC2.11□□□□□ -2.07
NEBP20929 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC2.11□□□□□ -2.07
NEBP20929 AL627230.1-201ENST00000613077 211 ntBASIC2.11□□□□□ -2.07
NEBP20929 AL591926.8-201ENST00000616876 211 ntBASIC2.11□□□□□ -2.07
NEBP20929 AL356863.1-201ENST00000623378 1080 ntBASIC2.11□□□□□ -2.07
NEBP20929 CR392039.4-201ENST00000624968 501 ntBASIC2.11□□□□□ -2.07
NEBP20929 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC2.11□□□□□ -2.07
NEBP20929 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 AC005034.3-201ENST00000604845 1747 ntBASIC2.11□□□□□ -2.07
NEBP20929 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NEBP20929 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NEBP20929 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms