Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 CYP21A1P-202ENST00000354927 1481 ntBASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 AC027612.3-201ENST00000413684 1047 ntBASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXOSC1Q9Y3B2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EXOSC1Q9Y3B2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
EXOSC1Q9Y3B2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EXOSC1Q9Y3B2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EXOSC1Q9Y3B2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EXOSC1Q9Y3B2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.58■□□□□ 0.41
EXOSC1Q9Y3B2 AC079598.2-202ENST00000546624 1451 ntBASIC17.58■□□□□ 0.41
EXOSC1Q9Y3B2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
EXOSC1Q9Y3B2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.58■□□□□ 0.4
EXOSC1Q9Y3B2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.58■□□□□ 0.4
EXOSC1Q9Y3B2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.58■□□□□ 0.4
EXOSC1Q9Y3B2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.58■□□□□ 0.4
EXOSC1Q9Y3B2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.58■□□□□ 0.4
EXOSC1Q9Y3B2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.58■□□□□ 0.4
EXOSC1Q9Y3B2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXOSC1Q9Y3B2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EXOSC1Q9Y3B2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXOSC1Q9Y3B2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EXOSC1Q9Y3B2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXOSC1Q9Y3B2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
EXOSC1Q9Y3B2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 AC090340.1-201ENST00000620778 4980 ntBASIC17.57■□□□□ 0.4
EXOSC1Q9Y3B2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 AC008406.3-201ENST00000620001 1374 ntBASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EXOSC1Q9Y3B2 AC005082.1-201ENST00000413042 2259 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms