Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
UBQLN1Q9UMX0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
UBQLN1Q9UMX0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
UBQLN1Q9UMX0 LINC01521-201ENST00000504184 1943 ntBASIC21.14■□□□□ 0.98
UBQLN1Q9UMX0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.14■□□□□ 0.98
UBQLN1Q9UMX0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 FAM197Y1-201ENST00000421178 764 ntBASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 KSR1P1-201ENST00000446298 240 ntBASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBQLN1Q9UMX0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN1Q9UMX0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 AC026471.5-201ENST00000615068 467 ntBASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.12■□□□□ 0.97
UBQLN1Q9UMX0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 TCF3P1-201ENST00000423021 1937 ntBASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
UBQLN1Q9UMX0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN1Q9UMX0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN1Q9UMX0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN1Q9UMX0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN1Q9UMX0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
UBQLN1Q9UMX0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN1Q9UMX0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.1■□□□□ 0.97
UBQLN1Q9UMX0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.1■□□□□ 0.97
UBQLN1Q9UMX0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN1Q9UMX0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
UBQLN1Q9UMX0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN1Q9UMX0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN1Q9UMX0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN1Q9UMX0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms