Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.27■■□□□ 1
CAPN11Q9UMQ6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN11Q9UMQ6 AC231657.2-201ENST00000624556 255 ntBASIC21.27■■□□□ 1
CAPN11Q9UMQ6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.27■■□□□ 1
CAPN11Q9UMQ6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.27■■□□□ 1
CAPN11Q9UMQ6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN11Q9UMQ6 KRT17P1-201ENST00000399211 1546 ntBASIC21.27■■□□□ 1
CAPN11Q9UMQ6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN11Q9UMQ6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.27■■□□□ 1
CAPN11Q9UMQ6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CAPN11Q9UMQ6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CAPN11Q9UMQ6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CAPN11Q9UMQ6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CAPN11Q9UMQ6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.27■□□□□ 0.99
CAPN11Q9UMQ6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CAPN11Q9UMQ6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CAPN11Q9UMQ6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CAPN11Q9UMQ6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN11Q9UMQ6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 AL512625.2-201ENST00000417533 625 ntBASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 AC007322.1-201ENST00000426983 750 ntBASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 BID-214ENST00000617586 542 ntTSL 5 BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 AC018553.1-201ENST00000616682 1458 ntBASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN11Q9UMQ6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.24■□□□□ 0.99
CAPN11Q9UMQ6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 AC116351.2-201ENST00000606540 1585 ntBASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN11Q9UMQ6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN11Q9UMQ6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms