Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
COMMD9Q9P000 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD9Q9P000 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD9Q9P000 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.73■□□□□ 0.27
COMMD9Q9P000 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD9Q9P000 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD9Q9P000 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.73■□□□□ 0.27
COMMD9Q9P000 TPRG1LP1-201ENST00000598702 760 ntBASIC16.73■□□□□ 0.27
COMMD9Q9P000 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.73■□□□□ 0.27
COMMD9Q9P000 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
COMMD9Q9P000 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COMMD9Q9P000 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
COMMD9Q9P000 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
COMMD9Q9P000 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD9Q9P000 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD9Q9P000 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD9Q9P000 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD9Q9P000 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 AC061975.6-201ENST00000579045 1553 ntBASIC16.72■□□□□ 0.27
COMMD9Q9P000 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.72■□□□□ 0.27
COMMD9Q9P000 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
COMMD9Q9P000 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COMMD9Q9P000 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.72■□□□□ 0.27
COMMD9Q9P000 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.72■□□□□ 0.27
COMMD9Q9P000 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.72■□□□□ 0.27
COMMD9Q9P000 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.72■□□□□ 0.27
COMMD9Q9P000 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COMMD9Q9P000 AC079598.2-202ENST00000546624 1451 ntBASIC16.72■□□□□ 0.27
COMMD9Q9P000 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COMMD9Q9P000 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.72■□□□□ 0.27
COMMD9Q9P000 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.72■□□□□ 0.27
COMMD9Q9P000 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD9Q9P000 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD9Q9P000 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD9Q9P000 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
COMMD9Q9P000 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD9Q9P000 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.71■□□□□ 0.27
COMMD9Q9P000 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.71■□□□□ 0.27
COMMD9Q9P000 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.71■□□□□ 0.27
COMMD9Q9P000 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD9Q9P000 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD9Q9P000 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.71■□□□□ 0.27
COMMD9Q9P000 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD9Q9P000 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD9Q9P000 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD9Q9P000 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
COMMD9Q9P000 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.71■□□□□ 0.27
COMMD9Q9P000 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD9Q9P000 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.71■□□□□ 0.27
COMMD9Q9P000 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.71■□□□□ 0.27
COMMD9Q9P000 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.71■□□□□ 0.27
COMMD9Q9P000 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD9Q9P000 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD9Q9P000 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
COMMD9Q9P000 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD9Q9P000 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.71■□□□□ 0.27
COMMD9Q9P000 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD9Q9P000 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.71■□□□□ 0.27
COMMD9Q9P000 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.71■□□□□ 0.27
COMMD9Q9P000 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 AL138781.2-201ENST00000617896 1843 ntBASIC16.7■□□□□ 0.26
COMMD9Q9P000 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
COMMD9Q9P000 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COMMD9Q9P000 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.7■□□□□ 0.26
COMMD9Q9P000 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
COMMD9Q9P000 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 KRT87P-202ENST00000534226 1464 ntBASIC16.7■□□□□ 0.26
COMMD9Q9P000 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.7■□□□□ 0.26
COMMD9Q9P000 AC110285.6-201ENST00000617652 491 ntBASIC16.7■□□□□ 0.26
COMMD9Q9P000 AL358852.1-201ENST00000623174 1268 ntBASIC16.7■□□□□ 0.26
COMMD9Q9P000 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms