Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPHK1Q9NYA1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPHK1Q9NYA1 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.98■□□□□ 0.63
SPHK1Q9NYA1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPHK1Q9NYA1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
SPHK1Q9NYA1 AC009237.14-201ENST00000609975 1594 ntBASIC18.98■□□□□ 0.63
SPHK1Q9NYA1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SPHK1Q9NYA1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.98■□□□□ 0.63
SPHK1Q9NYA1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 YBX1P10-201ENST00000444752 975 ntBASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 AC004264.1-201ENST00000608354 794 ntBASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPHK1Q9NYA1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.96■□□□□ 0.63
SPHK1Q9NYA1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 RPS2P4-201ENST00000476944 856 ntBASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 TMEM179-206ENST00000616017 1645 ntBASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 HTR7P1-201ENST00000538670 1336 ntBASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPHK1Q9NYA1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.94■□□□□ 0.62
SPHK1Q9NYA1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SPHK1Q9NYA1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPHK1Q9NYA1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPHK1Q9NYA1 AC073130.3-201ENST00000624389 2278 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms