Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 AC018553.1-201ENST00000616682 1458 ntBASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZCCHC3Q9NUD5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 AC073210.2-201ENST00000430369 194 ntBASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 AC097658.1-201ENST00000475555 843 ntBASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 AC116351.2-201ENST00000606540 1585 ntBASIC18.47■□□□□ 0.55
ZCCHC3Q9NUD5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 AL109923.1-201ENST00000618799 583 ntBASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZCCHC3Q9NUD5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.46■□□□□ 0.54
ZCCHC3Q9NUD5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 AL138781.1-201ENST00000566567 1274 ntBASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 AC006557.6-201ENST00000623071 864 ntBASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 MYC-209ENST00000641252 345 ntBASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZCCHC3Q9NUD5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.44■□□□□ 0.54
ZCCHC3Q9NUD5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms