Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 KRT17P3-201ENST00000420566 1262 ntBASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 CD99P1-205ENST00000527459 561 ntBASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.09■□□□□ 0.49
UBQLN4Q9NRR5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.08■□□□□ 0.49
UBQLN4Q9NRR5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
UBQLN4Q9NRR5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.08■□□□□ 0.49
UBQLN4Q9NRR5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBQLN4Q9NRR5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBQLN4Q9NRR5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.08■□□□□ 0.49
UBQLN4Q9NRR5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UBQLN4Q9NRR5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UBQLN4Q9NRR5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 AP006587.1-201ENST00000534129 1502 ntBASIC18.08■□□□□ 0.48
UBQLN4Q9NRR5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms