Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 C2orf69P4-201ENST00000565394 541 ntBASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 AL031963.3-201ENST00000606441 850 ntBASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CTPS2Q9NRF8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 AL109923.1-201ENST00000618799 583 ntBASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTPS2Q9NRF8 AC098818.2-201ENST00000564925 2320 ntBASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 KRT8P20-201ENST00000423953 1409 ntBASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 KRT16P6-202ENST00000425692 1426 ntBASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTPS2Q9NRF8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CTPS2Q9NRF8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms