Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 AFG3L1P-217ENST00000557444 2447 ntBASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF4Q9NR80 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 HLA-G-202ENST00000376815 851 ntBASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 HLA-G-203ENST00000376818 1127 ntBASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF4Q9NR80 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 AC073912.3-201ENST00000624414 853 ntBASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 AL135905.2-201ENST00000584934 1404 ntBASIC20.6■□□□□ 0.89
ARHGEF4Q9NR80 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 AP001412.1-201ENST00000608405 714 ntBASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 KRT16P6-202ENST00000425692 1426 ntBASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF4Q9NR80 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 TSPY7P-201ENST00000431358 1114 ntBASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.58■□□□□ 0.89
ARHGEF4Q9NR80 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms