Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.6■□□□□ 0.89
CD248Q9HCU0 AC005829.2-201ENST00000571422 1056 ntBASIC20.6■□□□□ 0.89
CD248Q9HCU0 MIR4497-201ENST00000583208 89 ntBASIC20.6■□□□□ 0.89
CD248Q9HCU0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CD248Q9HCU0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CD248Q9HCU0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CD248Q9HCU0 AC005082.1-201ENST00000413042 2259 ntBASIC20.6■□□□□ 0.89
CD248Q9HCU0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.59■□□□□ 0.89
CD248Q9HCU0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.59■□□□□ 0.89
CD248Q9HCU0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CD248Q9HCU0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.59■□□□□ 0.89
CD248Q9HCU0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.59■□□□□ 0.89
CD248Q9HCU0 MIR718-201ENST00000390190 70 ntBASIC20.59■□□□□ 0.89
CD248Q9HCU0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.59■□□□□ 0.89
CD248Q9HCU0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.59■□□□□ 0.89
CD248Q9HCU0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CD248Q9HCU0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.59■□□□□ 0.89
CD248Q9HCU0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.59■□□□□ 0.89
CD248Q9HCU0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.59■□□□□ 0.89
CD248Q9HCU0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.59■□□□□ 0.89
CD248Q9HCU0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.59■□□□□ 0.89
CD248Q9HCU0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD248Q9HCU0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD248Q9HCU0 TNXA-203ENST00000507684 2038 ntBASIC20.58■□□□□ 0.89
CD248Q9HCU0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
CD248Q9HCU0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD248Q9HCU0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD248Q9HCU0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD248Q9HCU0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD248Q9HCU0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD248Q9HCU0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD248Q9HCU0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CD248Q9HCU0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.58■□□□□ 0.89
CD248Q9HCU0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CD248Q9HCU0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.58■□□□□ 0.89
CD248Q9HCU0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CD248Q9HCU0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CD248Q9HCU0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.58■□□□□ 0.89
CD248Q9HCU0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.58■□□□□ 0.89
CD248Q9HCU0 AC120498.8-201ENST00000614275 531 ntBASIC20.58■□□□□ 0.89
CD248Q9HCU0 AL356652.1-201ENST00000615962 565 ntBASIC20.58■□□□□ 0.89
CD248Q9HCU0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.58■□□□□ 0.89
CD248Q9HCU0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CD248Q9HCU0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CD248Q9HCU0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CD248Q9HCU0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CD248Q9HCU0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CD248Q9HCU0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
CD248Q9HCU0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CD248Q9HCU0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CD248Q9HCU0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CD248Q9HCU0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CD248Q9HCU0 AC116562.4-201ENST00000641316 2276 ntBASIC20.57■□□□□ 0.88
CD248Q9HCU0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD248Q9HCU0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CD248Q9HCU0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD248Q9HCU0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.57■□□□□ 0.88
CD248Q9HCU0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD248Q9HCU0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD248Q9HCU0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD248Q9HCU0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CD248Q9HCU0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CD248Q9HCU0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CD248Q9HCU0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.57■□□□□ 0.88
CD248Q9HCU0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.57■□□□□ 0.88
CD248Q9HCU0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.57■□□□□ 0.88
CD248Q9HCU0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.57■□□□□ 0.88
CD248Q9HCU0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.57■□□□□ 0.88
CD248Q9HCU0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD248Q9HCU0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CD248Q9HCU0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD248Q9HCU0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.56■□□□□ 0.88
CD248Q9HCU0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.56■□□□□ 0.88
CD248Q9HCU0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CD248Q9HCU0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CD248Q9HCU0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.56■□□□□ 0.88
CD248Q9HCU0 AC112907.3-201ENST00000577781 2400 ntBASIC20.56■□□□□ 0.88
CD248Q9HCU0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CD248Q9HCU0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD248Q9HCU0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD248Q9HCU0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CD248Q9HCU0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD248Q9HCU0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.56■□□□□ 0.88
CD248Q9HCU0 PGM5P4-201ENST00000421970 445 ntBASIC20.56■□□□□ 0.88
CD248Q9HCU0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms