Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK1G1Q9HCP0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK1G1Q9HCP0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK1G1Q9HCP0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
CSNK1G1Q9HCP0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 KRT8P8-201ENST00000434750 1448 ntBASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 KSR1P1-201ENST00000446298 240 ntBASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G1Q9HCP0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 CD177P1-201ENST00000606252 935 ntBASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G1Q9HCP0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G1Q9HCP0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 TSPY7P-201ENST00000431358 1114 ntBASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 AL445675.2-201ENST00000620291 557 ntBASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.59■□□□□ 0.89
CSNK1G1Q9HCP0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms