Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC29.19■■■□□ 2.26
SCAF1Q9H7N4 KRT126P-201ENST00000549467 1181 ntBASIC29.19■■■□□ 2.26
SCAF1Q9H7N4 AC005332.8-201ENST00000622750 2735 ntBASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
SCAF1Q9H7N4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 TNXA-203ENST00000507684 2038 ntBASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC29.17■■■□□ 2.26
SCAF1Q9H7N4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 AP006587.3-201ENST00000525742 1516 ntBASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 AL158211.5-201ENST00000623583 2518 ntBASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 AL137013.1-201ENST00000432946 1228 ntBASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 AC100791.3-201ENST00000617619 330 ntBASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC29.16■■■□□ 2.26
SCAF1Q9H7N4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 AC026396.1-201ENST00000419388 421 ntBASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SCAF1Q9H7N4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SCAF1Q9H7N4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SCAF1Q9H7N4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC29.14■■■□□ 2.26
SCAF1Q9H7N4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
SCAF1Q9H7N4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC29.14■■■□□ 2.26
SCAF1Q9H7N4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC29.14■■■□□ 2.26
SCAF1Q9H7N4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC29.14■■■□□ 2.25
SCAF1Q9H7N4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC29.14■■■□□ 2.25
SCAF1Q9H7N4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC29.14■■■□□ 2.25
SCAF1Q9H7N4 FAM21FP-204ENST00000608637 956 ntBASIC29.14■■■□□ 2.25
SCAF1Q9H7N4 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC29.14■■■□□ 2.25
SCAF1Q9H7N4 KRT8P9-201ENST00000558927 1449 ntBASIC29.14■■■□□ 2.25
SCAF1Q9H7N4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 KRT18P56-201ENST00000507275 550 ntBASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 MTND2P7-201ENST00000521337 640 ntBASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC29.13■■■□□ 2.25
SCAF1Q9H7N4 AL034346.1-201ENST00000568244 1277 ntBASIC29.13■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms