Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
COMMD4Q9H0A8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
COMMD4Q9H0A8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COMMD4Q9H0A8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COMMD4Q9H0A8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
COMMD4Q9H0A8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COMMD4Q9H0A8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
COMMD4Q9H0A8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COMMD4Q9H0A8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 HLA-G-202ENST00000376815 851 ntBASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 HLA-G-203ENST00000376818 1127 ntBASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.35■□□□□ 0.37
COMMD4Q9H0A8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 AC013268.1-206ENST00000638368 961 ntBASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 AC112229.1-201ENST00000639295 961 ntBASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD4Q9H0A8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
COMMD4Q9H0A8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.33■□□□□ 0.37
COMMD4Q9H0A8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.33■□□□□ 0.37
COMMD4Q9H0A8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.33■□□□□ 0.37
COMMD4Q9H0A8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
COMMD4Q9H0A8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COMMD4Q9H0A8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.33■□□□□ 0.37
COMMD4Q9H0A8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COMMD4Q9H0A8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COMMD4Q9H0A8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 MCRIP2P1-201ENST00000394346 511 ntBASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 AL032819.2-201ENST00000624543 2162 ntBASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD4Q9H0A8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms