Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 UPK3BP1-201ENST00000428678 509 ntBASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 YBX1P2-201ENST00000489612 999 ntBASIC25.63■■□□□ 1.69
PCDH11XQ9BZA7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDH11XQ9BZA7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC25.62■■□□□ 1.69
PCDH11XQ9BZA7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDH11XQ9BZA7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH11XQ9BZA7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH11XQ9BZA7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH11XQ9BZA7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDH11XQ9BZA7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH11XQ9BZA7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH11XQ9BZA7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH11XQ9BZA7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH11XQ9BZA7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
PCDH11XQ9BZA7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH11XQ9BZA7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 KRT8P8-201ENST00000434750 1448 ntBASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 AL031133.1-201ENST00000406807 723 ntBASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC25.61■■□□□ 1.69
PCDH11XQ9BZA7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 SMG8-203ENST00000578922 2178 ntBASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 AL023803.3-201ENST00000615559 522 ntBASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC25.6■■□□□ 1.69
PCDH11XQ9BZA7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 COX11P1-201ENST00000489116 835 ntBASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH11XQ9BZA7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC25.58■■□□□ 1.69
PCDH11XQ9BZA7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms