Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 TUBB8P6-201ENST00000436895 1288 ntBASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 AP000867.3-201ENST00000524675 377 ntBASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 MIR3197-201ENST00000582241 73 ntBASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.75■□□□□ 0.75
LRFN3Q9BTN0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 AP001005.1-201ENST00000571755 1248 ntBASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 TERC-201ENST00000602385 541 ntBASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRFN3Q9BTN0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 AC092597.1-201ENST00000487352 616 ntBASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 AC055717.3-201ENST00000622967 595 ntBASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN3Q9BTN0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 CHCHD2P8-201ENST00000429873 447 ntBASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 KRT8P26-201ENST00000534154 1276 ntBASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 AC012615.1-201ENST00000565797 1299 ntBASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.72■□□□□ 0.75
LRFN3Q9BTN0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms